| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0997 |
|---|
| Symbol | |
|---|
| ID | 4010510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 1033012 |
|---|
| End bp | 1034802 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637953600 |
|---|
| Product | branched chain amino acid ABC transporter ATPase/inner membrane protein |
|---|
| Protein accession | YP_556220 |
|---|
| Protein GI | 91781013 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAA AATGGCTCGT CGCGGTTGGA TGCCTGGCGC TTGTGGTCGC TCCGCTCGTG
CTCCCGGATT TTTACACCAC TTTGCTCATC TATACAGGAC TTGCCAGCAT TGTCGTGCTG
GGACTGGTCG TGCTGACCGG CGTAGGAGGC ATGACCTCGT TCGGGCAGGC GACTTTTGTC
GGCCTGAGCG CTTACACCAC GGGCGCGATC TCAACCACGC TCGGATGGTC GCCCTGGGTC
ACGCTGCCGA TAGCCGTGCT CCTGACCTGT CTGGCTGCAG CAGTGATCGG TCTGTTGACC
GTCCGTTTGT CAGGTCACTA CCTGGTACTC GGCACAGTTG CATGGAGCGT GGGGCTTTAT
TATCTGTTCG GCAATCTGCC ATTTCTGGGT GGCTACAACG GTATATCCGA CATCCCGCCG
ATCACCTTTT TTGGGTTTTC GCTCGCGGGT TCCCGCCCGT CTTATTACCT GATATGGGCC
GTCGTCGCTG TCGCGGTGGT CTGCACCATG AACCTGCTCG ATTCGCGCAC GGGCCGTGCC
ATCCGTTCAC TGCGCAATCC GGTGCTCGCC GAGAGCTTTG GCATTGACAT CTACCGGCTT
CGACTGCCGG TGTTTATCTA CGCGGCGTTC CTCGCAGCCA TTTCCGGATG GCTGTATGCC
CATTATTTCC GCTTCGTCAA TCCGGCACCC TTCGGCTTCG ACGGCAGCAT CGATTACGCA
TTCATGCTGG TGCTCGGGGG CGCGACCCAG GTATTCGGCG CGATAGTCGG CGCATTCGTG
CTCGTGGTCG GCAAGATGCT GCTTCAGATC GGCCTGACGC ATGTCCTTCC GGGGCCGGTA
CACTGGGATC AAATCTTCTT CGGCTTGCTT ATCATTGGAT TATTCCATCA TGCGCGCTCG
GGCATCCTGT CGGCACGTCG CATGGGCGCA GCCAGTCCAG ATAATCACGA GGCCGACACG
GAGGACACTG TCTGGATCCC AGCGGAAATC CCTTGCCGGT TTTCATCATC CCAGGCCAAT
GCACTCGCGG CGCAACCGTC GGCCACGCTG CGCGTGGAGA AGGTGAGCCG ACGTTTCGGG
TCGCTGCTTG CGGTGAATGG CGTGAGCTTT GACGCGGCGC CGGGACAGGT CGTCGGTGTA
ATCGGACCGA ACGGAGCGGG TAAAAGCACC CTCTTTAACC TGATCGCGGG CACGCTTTCC
GTCGACCAGG GCGAGGTCTG GCTAGGCGAG CATTGTCTGA GCCGCCTCAG CCCCCATCAG
GTGATACGCC ATCGTGTCGC GCGCACTTTC CAGCACGTGC AACTCCGGCC CGGGCAGAGT
GTGCTCAGCA ACGTCGCGCT GGGTGCGCAC TGGCTCGGCA GAAAGGGCTT TATCGCGTCG
CTGCTGCGCC TCGACCGCCA CGAGGAACGC ATGCTGAAAG CGCGGGCCAT GGCGGCCATC
GAGCGCGCGG GGCTAAAAGA CGTCGCCTTC GCCGATGCCC ATACGCTGCC GCTCGGCCGC
CAGCGTGTGG TGGAGATCGC GCGGGCGCTA AGCGCGTCAC CGTCCGTCCT GCTGCTTGAT
GAACCTGCCG CGGGGCTTCG GCATCAGGAA AAACGGGCGC TCGGCGCATT GATCCAGCAG
TTGCGCGAAG AAGGGCTTAC CGTGCTGATC GTGGAACACG ACATGGAATT CCTGATGGAT
CTGGTCGATA AAATAGTCGT GGTAAATTTC GGCACCAAAC TATGCGAGGG GATGCCCCAA
ACAGTGCAAA GCGATCCGCA AGTGATCGAA ACTTATCTGG GAGCAGAATG A
|
|---|
| Protein sequence | MKRKWLVAVG CLALVVAPLV LPDFYTTLLI YTGLASIVVL GLVVLTGVGG MTSFGQATFV
GLSAYTTGAI STTLGWSPWV TLPIAVLLTC LAAAVIGLLT VRLSGHYLVL GTVAWSVGLY
YLFGNLPFLG GYNGISDIPP ITFFGFSLAG SRPSYYLIWA VVAVAVVCTM NLLDSRTGRA
IRSLRNPVLA ESFGIDIYRL RLPVFIYAAF LAAISGWLYA HYFRFVNPAP FGFDGSIDYA
FMLVLGGATQ VFGAIVGAFV LVVGKMLLQI GLTHVLPGPV HWDQIFFGLL IIGLFHHARS
GILSARRMGA ASPDNHEADT EDTVWIPAEI PCRFSSSQAN ALAAQPSATL RVEKVSRRFG
SLLAVNGVSF DAAPGQVVGV IGPNGAGKST LFNLIAGTLS VDQGEVWLGE HCLSRLSPHQ
VIRHRVARTF QHVQLRPGQS VLSNVALGAH WLGRKGFIAS LLRLDRHEER MLKARAMAAI
ERAGLKDVAF ADAHTLPLGR QRVVEIARAL SASPSVLLLD EPAAGLRHQE KRALGALIQQ
LREEGLTVLI VEHDMEFLMD LVDKIVVVNF GTKLCEGMPQ TVQSDPQVIE TYLGAE
|
|---|
| |