Gene Bxe_C0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0996 
Symbol 
ID4010509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1031937 
End bp1033010 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content62% 
IMG OID637953599 
Productbranched chain amino acid ABC transporter inner membrane protein 
Protein accessionYP_556219 
Protein GI91781012 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.883581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG GGACGACCAT CGCATTTCTG TTGCAGGACG GTCTGACTTC GGGCGTGGTC 
TATGCGCTGG TCGCGCTGGC CATGATCCTG ATCTTTTCCG TCACACGGGT CCTTTTCATT
GCACAAGGTG AATTCGTCGC CTTCGGCGCG CTGACGATGG CGTCGCTCGA GCAACGGCAG
ATTCCGGGCA CCGTATATAT CCTGCTGATC TTCGGCGCCT GCTGTGCGGC TTCCGATTGC
TGGGCAATCC TGCGGCCCGG GGCGCGCATC GCCGCGCAAC CGGCATCGTG CACGCGACAC
CTTGCGCGGA TTGCCTTCCG TGATCTGGTC ATACCGGGAA TGATCGCAGC GCTCGTCGTA
TTGCTGGCGC CATTGCATCT CGGCCAATTG GTGAACGCGG TGCTGGCCGT TGCGCTTGTG
ACGCCGCTGG GCGCCATGAC CTACCGGCTG GCCTTCCTCA AAATCGCTGA CGCGGGGCCA
CTCGCGCTAC TGTTCGTCAG CGTGGCAGTT CACTTCGTTC TTCTCGGGAT AGGCCTTAGC
GTATTTGGCG CGGAAGGCTG GCGCACGCAG CCGTTCCTGC GCTCAGGAAT TACCCTTGGC
AATTTTTCGA TCCAGGGACA AGTGATCGTC GTGTGGTGCG CCAGCGGATT GATGCTGCTC
TCGCTGTGGC TGTTCTTCTC CAAAGCCTAT CTCGGTCGGG TGCTCATCGC GACCGCCCGA
AACCGGCGCG CGGCCAAGCT AATGGGCGTG CGCCCGGAAC TTGCCGGCAA GGCGGCGTTT
GGCGTTGCAG CGGCAATCAG CGCGCTGTCG GGAATCCTGA TCGCGCCTTC GATTACCGTC
TACTACGACT CCGGCTTCCT GATTGTCCTG AAGGGACTCG TCGCGGCGGT GATCGGCGCT
ATGTCGAGCT ACCCACTGGC GGCGCTCGGG GCGCTTATCG TCGGCGTTAC CGATTCATCG
GCCGCATTCT TCGCAAGCAC GTTCAAGGAC ACGATCGTCT TCCTGCTGCT AATACCGTTC
CTGCTGTGGA TGTCCGTGCG CGTCGGCCGG GTCGCCGAAG TCGATGAGGA ATGA
 
Protein sequence
MPDGTTIAFL LQDGLTSGVV YALVALAMIL IFSVTRVLFI AQGEFVAFGA LTMASLEQRQ 
IPGTVYILLI FGACCAASDC WAILRPGARI AAQPASCTRH LARIAFRDLV IPGMIAALVV
LLAPLHLGQL VNAVLAVALV TPLGAMTYRL AFLKIADAGP LALLFVSVAV HFVLLGIGLS
VFGAEGWRTQ PFLRSGITLG NFSIQGQVIV VWCASGLMLL SLWLFFSKAY LGRVLIATAR
NRRAAKLMGV RPELAGKAAF GVAAAISALS GILIAPSITV YYDSGFLIVL KGLVAAVIGA
MSSYPLAALG ALIVGVTDSS AAFFASTFKD TIVFLLLIPF LLWMSVRVGR VAEVDEE