Gene Bxe_C0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0974 
Symbol 
ID4010487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1006930 
End bp1008318 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content62% 
IMG OID637953578 
Productmajor facilitator superfamily aromatic acid/H(+) symporter 
Protein accessionYP_556198 
Protein GI91780991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000109951 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAGA CGATCCATGC CGGCGCGCGC CTCGACAGAT TACCGTTGAG TGCATTTCAT 
TGGCGTCTGT TTTTCCTTAT CGGTTCGGGC CTCTTTCTCG ATGCGTTCGA CGTCTATCTG
GGCGGCGTCG TCACCGGCGC GCTGCTGAAG TCCGGATGGT CGACCCTTGA AATGAACGCG
TGGTTCACCA CGATGACTTT CGCCGGGCTG ATGGTCGGCG CGTGGGCCGC AGGTCTGCTG
GGAGACTGGT TTGGCCGGCG GTTTTCGTAT CAGGTCAATC TGATCATCTT CGGCGGCGCG
TCGCTGGCCG CCGTGTTCGC GCCCAGCATG TACTGGCTCA TTGGGCTGCG GTTCATCATG
GGGATCGGTA TGGGGGCGGA GATCGTTATC TCGTACGGCA TGCTGTCCGA GTTCGTACCG
CCTCGCTATC GGGGCCGCTT GCTGGCGGCG CTGTCGCTGT TCGCCAATTC GGCCGTGTTC
GTCGCTTCAC TGGCGAGCCT GTGGATCATC CCGGCTTTCG GCTGGCGGTA TATGTTCGCG
ATCACGGGCA TTGCGGCAAC GATCGTGTGG TTCATGCGCA AGTCCATGCC GGAATCGCCG
CGCTGGCTCG AAAACGAAGG GCGCCTTGCC GAGGCAGACG CGCTCCTCGA TTCCATCGAG
GGGAAAATCG CGCTCACGCA CACGCTGCCC GATTACTCGC GCGACGATGT GCTGCAAACC
GGTAAGGTGC CGCTCGGCGT GCTTTTTCAG CCGCCGGTGC TGTGGCGTTC GATTGTCGGC
TCCCTGATCA TGATCACGAT TGGCTTCAGC ATCTACGGGC TGATCAACTG GTTGCCGTCG
TTCTTCGTGC AACAGGGCTT CAACATTGTG AAGTCGCTGA CGTACAGCAC CGTGATGTCG
CTGGGGGCGC CGGCGGGAAC CATCATTGGC GTCCTTCTCG CGGACCGGGT CGGGCGACGT
CCGGCGATCA TCGGCGCAGC GCTTGTCACG GCCGTCATGG GTGTCTTCTA TCAGCATGCG
AGTTCGGCCA ACGCATTGCT GGTCGCGGGC TTCCTGCTGG TGGCGGGGAT CTACGTGATG
GTCGCGGTGG GACAGGGTGC GTACGTACCG GAGTTGTTCG CGACCTCGTA CCGTTTGCGG
GGCAGCGGTG TGTGCGGCAC GGCGGGCCGC GCGGCCAGTG CGCTGTGCCA GTTCTTTGTG
CTGTGGATGT TCTCTATCGG CGGCGTCAAC ATGGTGGTCG GCTCCGTCAT CGGCATCCAG
TTGCTGCTCG CGCTGGCAGT CTGGTTGCTG AAAATAGAAA CAAGCGGTTT GCGTCTCGAA
GAAACGGTCG ACGAGGGCAC CACGCTGGCG GCAGACAACC GGCGGCAGAT CGTGGATGTC
GGGCATTAA
 
Protein sequence
MQKTIHAGAR LDRLPLSAFH WRLFFLIGSG LFLDAFDVYL GGVVTGALLK SGWSTLEMNA 
WFTTMTFAGL MVGAWAAGLL GDWFGRRFSY QVNLIIFGGA SLAAVFAPSM YWLIGLRFIM
GIGMGAEIVI SYGMLSEFVP PRYRGRLLAA LSLFANSAVF VASLASLWII PAFGWRYMFA
ITGIAATIVW FMRKSMPESP RWLENEGRLA EADALLDSIE GKIALTHTLP DYSRDDVLQT
GKVPLGVLFQ PPVLWRSIVG SLIMITIGFS IYGLINWLPS FFVQQGFNIV KSLTYSTVMS
LGAPAGTIIG VLLADRVGRR PAIIGAALVT AVMGVFYQHA SSANALLVAG FLLVAGIYVM
VAVGQGAYVP ELFATSYRLR GSGVCGTAGR AASALCQFFV LWMFSIGGVN MVVGSVIGIQ
LLLALAVWLL KIETSGLRLE ETVDEGTTLA ADNRRQIVDV GH