Gene Bxe_C0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0967 
Symbol 
ID4010480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp999614 
End bp1001002 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content62% 
IMG OID637953571 
Productmajor facilitator superfamily aromatic acid/H(+) symporter 
Protein accessionYP_556191 
Protein GI91780984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTA CCGCTTACGC GGCCAGCCGG CTCGACCGCC TACCTTTAAG CGGCTTCCAC 
TGGCGTTTGC TGTGCGTCAT CGGCTTCGGG CTATTCCTTG AATTTTTTGA CCTGTACACG
GGCGGCGCCA TTGTCGGCGT ATTGCTCAAA CAGGGATGGT CGACACTGCA GCTCAACGCG
CTCTTCGGCA CGTTGACGTT CGCGGGCTTG ACCGTCGGAG CGATGATGGC GGGGATTATC
GGCGACCGTT ACGGCCGCCG CCTGGCCTAT CAGATCAATC TCGTGGTGTT CGGCATCGCG
TCGTTTGCAG CGGCGGTTGC GCCGGACATG TACTGGCTCA GCGCAATCCG CTTCATGATG
GGTCTCGGTA TCGGCGCAGA GGCCGTTATT TCGTACGGCA TGCTTGGCGA GTTCGTGCCG
CCGGGCTTTC GTGGCCGCAT GCTGGCATTC CTGTCGGTGT TCGGAAATTC CGCGGTGTTC
GTCGGTTCGC TGGTCAATCT CTGGGTTATT CCCCATCTGG GCTGGCGCTA CGTCTTCGTC
ATCGCGGGCA TTCTCGCCAT CACGCTGTGG ATCGTGCGCC GCTCGATTCC GGAATCGCCG
CGCTGGCTCG AGACAAAAGG GCGTATCGAC GAGGCGGAGG TCGTTCTCCA ACGGATCGAG
CGCAGCGTCG CGCGCGGCGG TGAACTGCCT TCGTATGCAC ACGAAGTGCC CGCGCCAACG
CCGCAAGTGT CCATTGGCGT GTTATTCACG CCGCCGATAC TTGTGCGTAC GCTCGTCGGT
TCAGCCATTC TTGTCTGCAT CGGCTTCAGC ATCTATGGGC TGATCAACTG GCTCCCGACG
TTCTTCATCC AGCAGGGCTT CGATATCGTC AAGTCGCTGA CATGGACGAC GGTTATCACG
CTGGGCGGCC CGGTGGGCTC CCTGCTCGGC GTTGCGGTGT CGGATCGGGT CGGCCGGCGT
CCCGCGATCA TCGCGTCGTG CGTCGTTACA GCGGTTTGCG GCCTGATTTA CCAGCAGGTC
GACTCGGCTT TCGCGCTGAT GGGGGTGGGC TTCCTGCTGG TGTGCTCCAT CTATGTGCTG
GTGGCGGTTG GACAAGGCGC TTACGTACCC GAGCTGTTCT CGACTTCGTA CCGGTTGCGG
GGGACGGGCG TTTGCATGAC CGCGGGACGG CTCGCCAGCG CAGGCTGCCA ATTCTTCATT
CTCTGGCTGT TCACGAAGGG TGGCGTACTG ATGGTGGTAG GCTCGGTCGT CGCGGCTCAG
CTTTTACTGG CGTTCGCCGT GTGGGCGATA CGGATCGAGA CCCGTGGCAA GCGGCTCGAA
GATCTCGATT CCGGCGTGCC GGGCGCCCCC ACCACGGAGC GCAGCCACTC GTACAGCAGC
GGTCAATAA
 
Protein sequence
MQSTAYAASR LDRLPLSGFH WRLLCVIGFG LFLEFFDLYT GGAIVGVLLK QGWSTLQLNA 
LFGTLTFAGL TVGAMMAGII GDRYGRRLAY QINLVVFGIA SFAAAVAPDM YWLSAIRFMM
GLGIGAEAVI SYGMLGEFVP PGFRGRMLAF LSVFGNSAVF VGSLVNLWVI PHLGWRYVFV
IAGILAITLW IVRRSIPESP RWLETKGRID EAEVVLQRIE RSVARGGELP SYAHEVPAPT
PQVSIGVLFT PPILVRTLVG SAILVCIGFS IYGLINWLPT FFIQQGFDIV KSLTWTTVIT
LGGPVGSLLG VAVSDRVGRR PAIIASCVVT AVCGLIYQQV DSAFALMGVG FLLVCSIYVL
VAVGQGAYVP ELFSTSYRLR GTGVCMTAGR LASAGCQFFI LWLFTKGGVL MVVGSVVAAQ
LLLAFAVWAI RIETRGKRLE DLDSGVPGAP TTERSHSYSS GQ