Gene Bxe_C0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0958 
Symbol 
ID4010471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp992587 
End bp993390 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content56% 
IMG OID637953563 
Producthydroxypyruvate isomerase 
Protein accessionYP_556183 
Protein GI91780976 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCT TCGCTGCCAA TCTGTCGATG CTCTTCACTG ACGTGCCGTT TCTCGAACGC 
ATTGCAGCGG CGCGCAGCGC AGGGTTCAAA GCTGTCGAAT GCCAGTTTCC CTATGCGCTG
GACAAGCACG AGCTGGCCTC CACGCTGAAC GAAAACGGGC TTGCACTGGC ATTGTTCAAT
TTGCCCGCGG GCGACTGGGA GGCCGGCGAA CGTGGGATCG CCTGCCATCC CGACCGGGTC
GGCGAGTTTC GTGACGGGGT ATGGCTTGCG CTCGAGTATG CGCAGGTGCT CGGCTGTTCG
CGCCTAAACT GTCTCGCTGG CAAATTGCCC GCCGGCGTTG TCGATGACGA AGCCAGAAGC
ACATTGCTGG CGAACCTGAA ATGGGCTGCG TCTAAACTTG AAAAGGTGGG AATTGCGTTG
CTGATCGAGC CGGTCAACAC GTTTGATGTT CCTGGTTTCG TGCTGACGAA CACCGACGAT
GCGGTATCGC TGATTCATGA CGCAGGCGTT TTCAATCTTT TTGTTCAATA CGACATTTAT
CATGCGCAGA GGATGAAGGG CGAACTCGCT AACACGATCC AGCGGCATCT TCCGCTGATC
GGTCATATGC AGTTGGCCGA CAACCCGGGG CGTCACGAGC CCGGTACAGG CGAGATCAAT
TTTCGGTGGC TGTTGCCCTA TATCGACACA CTTGGCTATG ACGGATACAT CGGTTGCGAA
TATATCCCCG CCAGTACGAC GATCAACAGC CTTGATTGGC TGAAGGACTC GATTCAAGCG
GAGTATGACC ATGGCAAGCA ATGA
 
Protein sequence
MPTFAANLSM LFTDVPFLER IAAARSAGFK AVECQFPYAL DKHELASTLN ENGLALALFN 
LPAGDWEAGE RGIACHPDRV GEFRDGVWLA LEYAQVLGCS RLNCLAGKLP AGVVDDEARS
TLLANLKWAA SKLEKVGIAL LIEPVNTFDV PGFVLTNTDD AVSLIHDAGV FNLFVQYDIY
HAQRMKGELA NTIQRHLPLI GHMQLADNPG RHEPGTGEIN FRWLLPYIDT LGYDGYIGCE
YIPASTTINS LDWLKDSIQA EYDHGKQ