| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0916 |
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| Symbol | |
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| ID | 4010429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 951254 |
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| End bp | 952351 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637953521 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556141 |
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| Protein GI | 91780934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000226254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.19283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG CTTTTTTTGC GTTGTATATA GTACTGCTGA CTTATGCGTC GTCGTCTGTT
GCCCAGTCCA GTGTTACGCT ATTTGGCATT CTGGATGAAG GTGTGAGTTA CACAAATAAC
ATTAAAGGAT CGAGCTCGAC GAAGACGGCC AGTGGCATCA AGTGGCCGAC ATACTGGGGT
ATCAAAGGTC AGGAAGATCT CGGAGGAGGC TGGGACGCCG TCTTCAATCT GCAGGATCAA
TTTGACATTA ATTCCGGTGC GATGGGATAT GGAGGACTGC TCTTTGGCAG ACTGGCTATC
GTCGGTCTTG CGAACAAGGA CTACGGGCAA GTGACGCTCG GCCGTCAAAG CGACTTCATG
AACGACTTCC TGTATCTCGT TTCAGATCGC GAACAGTATT TGACCCTGTA CTCGCTCGCG
CCGGGCAACC TGGATCGCAT CGGCGGTGGG CAACTGAACA ACTCGATCAA GTACCGTTAT
GGTTTGGGTA CGGGTATTTC GTTGGGTGCA ATGTACGCGT TTTCGAACTC CGGGACCGGA
ACGGCCGCTA ACGGTACTGC TCGCAGTTTC GAACTTCGGT ACACGAATCA ATCTGTCCGC
GCTCTTGCCG TTTACACCGA TATTCACGGT GTAAGCGTGG CGCCCGCCTC GTCGATCGGT
TCTTCCTCCT TTCTGGGTTA CCAGTTGGGG CTGGGTGCAT CGACCGTGGT GCCGCTAAAC
AGTTTGAGTA TTGCGGCGTT AGGCATGAGC TATACCTATC AGAAGCTGAC CGGTATGGTG
ACCTATACCA ATGTGCACAT GGACTCCGTT CGCGAATCCG GCGCTCTGCA GACGCTCACG
CTTGGAGGCA TTTACCGCTT TACACCCGCG TTTCTCCTTG AAGCTGGCGC TAGCACGTCG
CGCTTGAGTT CTTCCCGGTG GAATCAACTG GTGGCGACGT TGGACTATTA CCTGTCCAAG
GGAACCGACA TCTATCTTAC TGCTGACTAT GAGCATGCCA GTGGTCATGG GCAGACTGCC
GAATTGTATA TGTCAGGCGG ACCGTCAAGT ACGGGATCGC AGGCAATTGT GCGAGTAGGT
GTAAAGCACT ATTTTTAA
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| Protein sequence | MKKAFFALYI VLLTYASSSV AQSSVTLFGI LDEGVSYTNN IKGSSSTKTA SGIKWPTYWG
IKGQEDLGGG WDAVFNLQDQ FDINSGAMGY GGLLFGRLAI VGLANKDYGQ VTLGRQSDFM
NDFLYLVSDR EQYLTLYSLA PGNLDRIGGG QLNNSIKYRY GLGTGISLGA MYAFSNSGTG
TAANGTARSF ELRYTNQSVR ALAVYTDIHG VSVAPASSIG SSSFLGYQLG LGASTVVPLN
SLSIAALGMS YTYQKLTGMV TYTNVHMDSV RESGALQTLT LGGIYRFTPA FLLEAGASTS
RLSSSRWNQL VATLDYYLSK GTDIYLTADY EHASGHGQTA ELYMSGGPSS TGSQAIVRVG
VKHYF
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