| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0893 |
|---|
| Symbol | |
|---|
| ID | 4010406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 923805 |
|---|
| End bp | 924752 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637953498 |
|---|
| Product | anaerobic benzoate catabolism transcriptional regulator |
|---|
| Protein accession | YP_556118 |
|---|
| Protein GI | 91780911 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.187565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.182245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA CTGACTCAGC CGTGCCCCTG GACGAGCGTC CGGAGGACGC AACGCGGGCG
GAACGCGATC CTTTCCTGAC GGCGATGGGA GAGCGCGTGC GGCTCCTGCG CGCGCGCCGC
GGCATGACCC GCAAGACCCT GGCAACCGAG ACGGGTTTGT CCGAACGGCA TCTGGCCAAT
CTGGAGTCGG GCGTGGGCAA CGCGTCGGTG CTGGTGCTGC GGCAGATCGC GAGCACACTG
AATTGCCCGC TTGCCGAGGT GATCGGCGAC GAGACCACTG CGTCGGCAGA ATGGCTGCTG
ATCCGCGAGT TGCTGCACGG GCGTGATCAG GCCGCGCTGC AGCGGGCGCG CGTCGCGCTG
GCCGAGATGT TCGCGCAGGC GCCGCGCGAC CCTCACCGCA AGGACCGTAT CGCATTGATC
GGTTTGCGCG GCGCGGGCAA GTCGACGCTT GGGCGCATGC TCGCGCAGGA GCGCAAGGTG
CCGTTCGTTG AGCTGACGCG GGTGATCGAG CAACTGGCGG GCTGCCCGCC TTCCGAAATT
CATTCGCTGT ACGGCGCGAG CGCTTACCGG CGCTACGAGC ACCGCGCGCT CGAGGCGGTG
ATCCAGGAGC ATGAGAAGGC GGTCATCGCG TCGCCGGGTG GGCTGGTTTC GGAGTCGGGC
ACCTTCAACA TGCTGCTCGC GCACTGCTTC ACCGTATGGT TGCAGGCCAC CCCGGAAGAG
CATATGCGGC GGGTGGTTGC GCAAGGCGAC CTGCGGCCGA TGTCGGGCAA CAAGGAAGCG
ATGGACGATC TGAAGCGAAT CCTGGCGGGC CGCAGCGAAC TGTATGGACG AGCGGACATG
ACTTACGACA CCAGTGAGAA GACCCTCGCA GATGCCTATC TGCAATTGCG CGACCGTCTT
GCCGCACGAC TGGCGGCCGA AGCGCCGGAT GACGCACACG TGAACTGA
|
|---|
| Protein sequence | MNQTDSAVPL DERPEDATRA ERDPFLTAMG ERVRLLRARR GMTRKTLATE TGLSERHLAN
LESGVGNASV LVLRQIASTL NCPLAEVIGD ETTASAEWLL IRELLHGRDQ AALQRARVAL
AEMFAQAPRD PHRKDRIALI GLRGAGKSTL GRMLAQERKV PFVELTRVIE QLAGCPPSEI
HSLYGASAYR RYEHRALEAV IQEHEKAVIA SPGGLVSESG TFNMLLAHCF TVWLQATPEE
HMRRVVAQGD LRPMSGNKEA MDDLKRILAG RSELYGRADM TYDTSEKTLA DAYLQLRDRL
AARLAAEAPD DAHVN
|
|---|
| |