| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0845 |
|---|
| Symbol | |
|---|
| ID | 4010358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 872327 |
|---|
| End bp | 873709 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637953454 |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase(UDP- forming) |
|---|
| Protein accession | YP_556074 |
|---|
| Protein GI | 91780867 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0780472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCC TGGTTGTGGT CTCAAATCGT ACGGTCGACC CACGTAAAAC TGCTGCCGGC
GGCCTCGCTG TCGCTGTGCG GGAAAGTCTT CAGCGCACCG GTGGCCTTTG GTTCGGCTGG
AGCGGGAAAA TCTACGACGA GTCGGATGAG ATGACAAGCC GGCGTGGCGT TCACGTGCAA
ACACTCGGCA ATGTCACACT CGCCACAGTC GATCTGAGCC AGCAGGATCA TGACAACTAC
TATCTCGGCT ATGCGAACGG AGTGCTGTGG CCGGTCTTTC ACTATCGGCT GGATCTCGCG
GACTTCGACA CGCGCTTCGC TGCCGGTTAC CGGCGCGTGA ACCAGCTGTT TGCCGAGAAA
CTCCTTCCAC TGCTCAGACC CGATGACATC ATCTGGGTGC ACGACTATCA CCTGATTCCG
CTTGCAGCGG AATTACGCGC AATAGGCTGT GGTAACCGTA TCGGGTTCTT TCTGCATATT
CCAATGCCGC CGCCGATGAT CATGGCAGCC ATTCCGGAAC ACGAATGGTT GATGCGTTCG
TTGTTCGCCT ATGATCTCGT GGGCTTCCAG GGGCAGATCG ACGTCGAGCA CTTTACGCAT
TACGCCGAAT CCGAAGCGAA CGCCAGACAG GTCGGCCCGC AACAACTCCG TGCATTCAAT
CGCACATTGA GACTGGGTGC GTATCCCATC GGAATCGATG TGGAGGAGTT CGTCAGTCTC
GCCAATGGCA AGGAAGCGCG CGAGATGTTC ACGCGGATGC GTGACGAGTA TTCGCGTCGA
CGCCTGCTGC TAGGCGTCGA CCGGCTCGAT TACTCCAAAG GCTTGCCTCA GCGCATTCAC
GCGTTTCGAG AACTGCTTGC ACACTATCCA GAGAATCGCG ATAGCGCGAC CTTGATCCAG
ATTGCGTCGC CTAGCCGCGA AAGCGTGGCT GCCTATGACG ATCTTCGTCG TCAGATGGAC
AGCCTGTGCG GCGCGATCAA CGGCGACTAC GGTGAACTGG ACTGGATGCC GGTTCGCTAC
ATTCACCGGC ACGTGGCACG CAAGCGCCTG CCTGGTCTTT ATCGCGCGAG CAAGGTCGCG
CTGGTCACTC CGCTGCGCGA CGGGATGAAT CTCGTCGCCA AGGAATTTAT CGCCGCACAG
GATCCGTCTG ATCCCGGCAT GTTGGTACTG TCCCGTTTCG CCGGCGCCGC GGAGCAACTC
AAGGAAGCGT TGCTGGTCAA TCCCTACGAC ACGCAAGGCA CCGCGCATGC CATCCAAAGG
GCGCTGACCA TGCCGCTCGA TGAACGTCGC AATCGTCATG CTGCACTGAT GAAAAGGATT
CGCGAGCATG ACGTCCACTG GTGGTCTTCC AGTTTCCTGG ACACACTCCA GGATATTCCT
TGA
|
|---|
| Protein sequence | MSRLVVVSNR TVDPRKTAAG GLAVAVRESL QRTGGLWFGW SGKIYDESDE MTSRRGVHVQ
TLGNVTLATV DLSQQDHDNY YLGYANGVLW PVFHYRLDLA DFDTRFAAGY RRVNQLFAEK
LLPLLRPDDI IWVHDYHLIP LAAELRAIGC GNRIGFFLHI PMPPPMIMAA IPEHEWLMRS
LFAYDLVGFQ GQIDVEHFTH YAESEANARQ VGPQQLRAFN RTLRLGAYPI GIDVEEFVSL
ANGKEAREMF TRMRDEYSRR RLLLGVDRLD YSKGLPQRIH AFRELLAHYP ENRDSATLIQ
IASPSRESVA AYDDLRRQMD SLCGAINGDY GELDWMPVRY IHRHVARKRL PGLYRASKVA
LVTPLRDGMN LVAKEFIAAQ DPSDPGMLVL SRFAGAAEQL KEALLVNPYD TQGTAHAIQR
ALTMPLDERR NRHAALMKRI REHDVHWWSS SFLDTLQDIP
|
|---|
| |