Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0828 |
Symbol | |
ID | 4010341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 856626 |
End bp | 857978 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637953439 |
Product | major facilitator superfamily aromatic acid/H(+) symporter |
Protein accession | YP_556059 |
Protein GI | 91780852 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.420618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.255495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACAT CCGTTAATGC GGGCGCCCGG CTCGACCGAT TACCCATCAG CCGCTTTCAC TGGAAAATCC TCTTCCTCAT CGGCGCTGGC GTCGCGATCG ATGCGTTCGA CATCTATTTG GGCGGTACAG TGATGGCGGC GACCGTCAAG ACCGGCTTTG CGACGTTGCA CCAGGGCGCC TTGTTCATCT CGCTGACGTT CACCGGAATG CTGATTGGTG CCGGCGCCGC TGGCTATGTC GGCGACCGCT TCGGGCGGCG CTATTCGTAT CAGACCAATC TGCTGGTCTT CGGGCTCGCG GCGGTCGGAT GCTGGCTTGC GCCGAACATG CCGATGCTGA TCGTGGGTCG CTTCATCATG GGCGTCGGGC TGGGCGCCGA GGTGGTGGTG GCCACCGGCA CGCTGTGCGA GTTCGTGCCG CCGGCGTATC GCGGTCGCTG GGCGGCGCTG ATGAGCCTGA TGATTCACAT CGGCGTGCTG GCCGCGACCG GGCTGAGCTA CCTGATCATC CCACGCTTCG GCTGGCGGGT GATGTTCCTG ATCGCCGCTC TGGGCGCGCT GGTGATCTGG ATCATGCGCA AGCGCATGCC CGAATCGCCG CGCTGGCTCG AATCGGTCGG TCGCGAAGCC GAGGCCCAGG CGGTGCTGGA GCGCATCGAG GCGGAGGTCG CCCGACACCA CGGGTCGTTG CCGCCGGTGC AGTTGCAGCC GTCGGTCACG GCCGCCGCTG ACGGTCGCTC GTCACTGGCC GCACTCTTCG CTCGTGGCCA GTTGCGCAAG ACGCTCGTCG GCACGGTGAC CGGCGTCACG ATCAACATCG CGCTGTACGG CTTCTTGTCG TGGATCCCCA CCTTCCTCGT CAAGCAGGGC CTCGAGGTAT CGACGTCGCT GGGTTTCGCC ACGATCATCG CGTTCGGGGG TCCGCTGGGT GTGCTGGCTG GGCTGCTATT CACCGATCGG GTCGGGCGCA AGAAGGGGTT GATTGGTTTT GCTGCTGTGT CCGCGGTGCT CGGCGTCGCG TACTCGCACC TCCAGGGTCA GGTGCTGATC GGCACGGTCG GCTTCCTGGT CGAAGGCACG ATCTATGGCC TGGCGACGAT CGGGCTGTAT GGCTTCATCC CGGAGCTGTT CCCGACCGCG ATCCGGCTGC GTGGCACGGG CTGGTGCGGT GTGTGTTCGC GCGGTGCGTC GATTGGAATG CCTTACCTGA CGGTGATGTT GTTCGAGCGG TTCGGCGTGT CCGGCGTGAC CTCGATGGTG GCCGGGGTGT TGCTGTTGCT GATCGTGACC GTCGGTCTGT TCAGCGAGGA AACCAGCCAG CGTTCGCTGG AAAGCATTGC GTTGCAGGAC TGA
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Protein sequence | MSTSVNAGAR LDRLPISRFH WKILFLIGAG VAIDAFDIYL GGTVMAATVK TGFATLHQGA LFISLTFTGM LIGAGAAGYV GDRFGRRYSY QTNLLVFGLA AVGCWLAPNM PMLIVGRFIM GVGLGAEVVV ATGTLCEFVP PAYRGRWAAL MSLMIHIGVL AATGLSYLII PRFGWRVMFL IAALGALVIW IMRKRMPESP RWLESVGREA EAQAVLERIE AEVARHHGSL PPVQLQPSVT AAADGRSSLA ALFARGQLRK TLVGTVTGVT INIALYGFLS WIPTFLVKQG LEVSTSLGFA TIIAFGGPLG VLAGLLFTDR VGRKKGLIGF AAVSAVLGVA YSHLQGQVLI GTVGFLVEGT IYGLATIGLY GFIPELFPTA IRLRGTGWCG VCSRGASIGM PYLTVMLFER FGVSGVTSMV AGVLLLLIVT VGLFSEETSQ RSLESIALQD
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