| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0788 |
|---|
| Symbol | |
|---|
| ID | 4010211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 726628 |
|---|
| End bp | 727620 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637953325 |
|---|
| Product | peptide/opine/nickel ABC transporter inner membrane protein |
|---|
| Protein accession | YP_555945 |
|---|
| Protein GI | 91780738 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAC TTCCACCTTC TTCCCAAACG CCGCACCGGC TCGGCGCGCT CGAACCGGTG
CACCGCAGCA GCATGTTGCC GCAAGGCACC GAGCCCGGCC GCCCGTGGGG CAGCGGTGGA
GGCCCGGCAC CGCAGCGGGT GCGCCGGCGC AGCGTCGCGC AGCGAATGAA CCTGTCGACA
GGCGGCTGGA TCGGCCTCGC GATGGTCGGC TCCGCGCTGT TCGTCGCCGC GTTCGCACCG
TGGATCGCGC CGCATCCGGT CGGCGCGATT CTGACGCCCG ACGTGTTCGC CGGTTTCAGC
GCGAAGTTGC CGCTCGGCTC GGACTACCTC GGCCGCGACA TGCTGACCCG CATCATCTAC
GGGATGCGGC TGACGGTCGT GCTCGCGCTC GCCGCCGCGC TGCTCGCGGC GCTCACGGGG
ACCATGCTCG GGCTGCTCGC GGCCGTCGCC GGCCGTCGTA TCGACGAAAC GATGAGCCGC
CTGCTCGACG CGGTCACATC GATTCCGTCG AAGATGTTCG CGCTGATGAT CGTCGCCGCG
TTCGGTTCGT CGCTGCCGTT GCTGATCATG ACGGCCGCGG TGAGCTACAT GCCGGGCTCG
TACCGGATCG CGCGCTCGCT CGCGGTCAAC ATCGGCACGC TCGAATACGT GCAGGTGGCG
CAGGCGCGCG GCGAAAGCGC GCTGTACATC GCGTGCTTCG AGATGCTGCC GAACATGATT
CACCCGATGC TCACCGACAC CGGACTGCGC TTCACGTTCG TCGTGCTGCT GCTCTCCAGC
CTGAGCTTTC TCGGGCTCGG TGTGCAGCCG CCGTATGCGG ACCTCGGGTC GCTGGTGCGC
GAGAACATTG CCGGTCTCGG CGAAGGCGTG CCGGTCGTGA TCCTGCCGGC TATTGCGATC
GCCGTCCTGA CGGTCGGCGT GAACCTGCTG ATCGACGGGC TGCCGCACCG GGGCCGCCTC
AAAGGCGCGG CCGATGCCGA TGGAGGTCAT TGA
|
|---|
| Protein sequence | MTILPPSSQT PHRLGALEPV HRSSMLPQGT EPGRPWGSGG GPAPQRVRRR SVAQRMNLST
GGWIGLAMVG SALFVAAFAP WIAPHPVGAI LTPDVFAGFS AKLPLGSDYL GRDMLTRIIY
GMRLTVVLAL AAALLAALTG TMLGLLAAVA GRRIDETMSR LLDAVTSIPS KMFALMIVAA
FGSSLPLLIM TAAVSYMPGS YRIARSLAVN IGTLEYVQVA QARGESALYI ACFEMLPNMI
HPMLTDTGLR FTFVVLLLSS LSFLGLGVQP PYADLGSLVR ENIAGLGEGV PVVILPAIAI
AVLTVGVNLL IDGLPHRGRL KGAADADGGH
|
|---|
| |