Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0776 |
Symbol | |
ID | 4010223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 739121 |
End bp | 739933 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637953337 |
Product | polar amino acid ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_555957 |
Protein GI | 91780750 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.616971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTT TCATGTTCCA GCCTGCTTCC GCCGTTCGCT TCAACGCCGT GCAGCGCCTG GCGGCCGGCG CGGGTCTCGC GATGTCGATG ATGATCGGCG CCGCGCAAGT CACGCACGGC GCCGAAGCCG CCACGCTCAC CGCCGGTTCG CCGCCGTCGA GCGCACCGAC CACGTTCATG AACGTCAAGA CACAGCAGAT CGAAGGGCTG ATGCCCGATG TCGTGAAAGA GATCGGCAAA CGCGAGGGAT TTAACGTGTC GTACGACGCG GTGCCGTTCT CGGCGCTGAT CCAGTCGGTG GTGTCGGGCA AGATCGACAT CATCGTCGCG GGCATGACGC CGACGGCCAG GCGCGCCGAA GTAGTCGACT TCTCGCAGCC GGTCACGGCG TTCGGCGAAG GCATCATCGT CAAGGACACC AACAAAACCA ACTACAAGTC GGTGCAGGAC CTCAAGGGTA TGACCGTCGG CGCGCCGACC GGCACCGATT ACGGCGACCA GTTGAAGAAG CTCGGCATCT TCACCGAAGT GAAGATGTAC GACAGCCCCG CCGACATGAC GCGCGACGTG GCGCTTGGCC GGATTGTCGC GGGCTTTAAC GACTATCCGA TCCTCAAGGC GCAGGAAGCC GCGGGCGCGA TGGCGGGAAC GCGCGTCGAC GACGCCTATG TGCCGATGGA AAAGTTCGAT ATCGCGGTCG CCGTGAAGAA GGGCAACAGT GCGCTGCTCG CGAAGATCAA CGACGCGCTG ACGAAGATGA AAGCCGATGG CTCGCTCGAC GCGATTTTGA AGAAGTGGCA TCTCGCGGGT TGA
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Protein sequence | MLRFMFQPAS AVRFNAVQRL AAGAGLAMSM MIGAAQVTHG AEAATLTAGS PPSSAPTTFM NVKTQQIEGL MPDVVKEIGK REGFNVSYDA VPFSALIQSV VSGKIDIIVA GMTPTARRAE VVDFSQPVTA FGEGIIVKDT NKTNYKSVQD LKGMTVGAPT GTDYGDQLKK LGIFTEVKMY DSPADMTRDV ALGRIVAGFN DYPILKAQEA AGAMAGTRVD DAYVPMEKFD IAVAVKKGNS ALLAKINDAL TKMKADGSLD AILKKWHLAG
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