Gene Bxe_C0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0774 
Symbol 
ID4010225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp741343 
End bp742011 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID637953339 
ProductHAD family hydrolase 
Protein accessionYP_555959 
Protein GI91780752 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.59732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TCGAGCCGAA GTACATCACT TTCGACTGCT ATGGCACGCT GACCAACTTC 
CAGATGGGCC AGAGCGCGCG CGAGCTTTAC GGCGACAAGC TGGACCCCGC GAAGATGGAC
GAGTTTGTCG AGTTCTTCCG CGGCTACCGG ATGGACGAGA TTCTGGGTGC ATGGAAGCCG
TATCGCGACG TGGTCGTGAA TTCGGTACGC CGCACCTGCG AGCGCACCGG CGTGCCGTTC
GACGAAGCGA CCGCGCTGAA GATCTACGAG GCGGTGCCGG GCTGGGGCCC GCATGCGGAC
GTGCCGGAAG GGCTGTCGCG TCTCGCGTCG AAATACAAGC TCGTGATTCT GTCGAATGCG
TCGGACGACC AGATTCACAG CAACGTCGGG AAGCTCGGCG CGCCGTTCCA CAAGGTCTAC
ACCGCGCAGC AGGCGCAGGC ATACAAGCCG CTGCAGAAAG CGTTCGAGTA CATGTTCTCG
CAACTTGACT GCAATCCCGA GGACGTGCTG CACGTGTCGT CGAGCTTCCG CTACGACCTG
ATGACCGCAT ACGACATGGG CATCAGGCAC AAGGCGTTCG TCAACCGCCG CCACGAGCCG
CTGAACCCGT ACTACGGCGT CAATGAGGTA TCGGGCATTC CGCAACTGGC ATCGTTGCTC
GGTCTCTGA
 
Protein sequence
MIDFEPKYIT FDCYGTLTNF QMGQSARELY GDKLDPAKMD EFVEFFRGYR MDEILGAWKP 
YRDVVVNSVR RTCERTGVPF DEATALKIYE AVPGWGPHAD VPEGLSRLAS KYKLVILSNA
SDDQIHSNVG KLGAPFHKVY TAQQAQAYKP LQKAFEYMFS QLDCNPEDVL HVSSSFRYDL
MTAYDMGIRH KAFVNRRHEP LNPYYGVNEV SGIPQLASLL GL