| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0707 |
|---|
| Symbol | |
|---|
| ID | 4010292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 807876 |
|---|
| End bp | 809486 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637953394 |
|---|
| Product | putative AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_556014 |
|---|
| Protein GI | 91780807 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.706357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTG AAACAACTGA AGCTGCACCG CGCTGGGGTA CCCGCGTGGT ACAAGGCATC
GTTGCCGGTC ACGAATGCAA GGTGTACGAG CAGCGGCCCC GGTCAGTGGC GGAACTGCTC
GTCGACGCGC AGCGCTGGGC GGAACGCGAT TTCATCGTCC AGGGCGCCCG GCGAATCACC
GGCGCTCAGC ATGCGCATGC TGTCGCGCGA GTGGCGCGAA TGCTTCGCGA GCATGGCGTG
CGCACGCGCG ACCCCGTTGT CCTGCTCGGC TACAACCATA TCGAATGGCT GGTTACATTC
TGGGCACTCC AGGCGCTAGG CGCGACCGCT GTCCTGGGCA ATGCCTGGTG GAGCGATACC
GAGACGACCA CGGTACTCGA AACGGTCCGA CCGACGCTGG TCATTTCTGA CCGTGCACGC
GAACGGTTCG GACCGGGCGA CGCCGGCTTC ATCTCCTTTT CGGAACTGCG CCCATTCGTA
GAAGCAGGGG AAGAACTACC GCTCGATCTG ACACCAGTGG ACGAAGAATG GCCGGCATGG
GTGATCTTCA GCTCTGGCAC GACCGGCCAC GCCAAAGGCG TGGTGATGAG TCACCGCAGC
GTGATTGCGA ACATCCAGAA TGTCCTGACA CTCACAGGCC GTCTGCCAAG CGAATTGCCC
CCGAGCCATC GAGGCACGGT CAGTCTCGTG AGCATGCCGC TATTTCATCT GGCCGGAATC
CAGATCTCCC TGATGAGCAT GCTCTCAGGA GGAAAGCTTG TGTTTCTCGC TGGCAAATTC
GACCCGCTCG AAGTGCTTCG GCTGATGGAG CGGGAACGCG TGCGCTCCTG GGGCAGCGTA
CCCACCATGG TTTCCCGGGT CATCCAGCAT CCGGATTTTG GTAAATACGA TACGTCAAGT
GTTTCGAGTG TTCAGATGGG CGGAGCCGCA GTTCCACACG CATTGCGCCT GGAGGTCCAG
CAGGCGTTCC CGAATACGCG CCGTCGCGTT GGCAGCATGT ATGGCTTGAC CGAAGCCGGT
GGGGTACTCG CGGCGGGCTC GGGCGATGAT CTGGAAGGCA AACCCGGTTG CGTGGGCAAA
CCGCTGCCGT CTGTCGAAAT CGTCATCCGC AACCCTGACG CACAAGGTGT GGGAGAGATT
GCAGCCCGAG CACCGAGTGC GACGAGCGGC TATCTCGGCG ATCCGACGCC GATCGCGGAC
GCGGACGGCT GGGTCCTCAC GGGAGACCTT GGACGTTTCG ACGACGCCGG GTACTTGTAC
ATCGTCGGTC GTTCGAAGGA CACCATCATC CGCGGCGGAG AAAACATCGC CAGCGTCCAC
GTCGAATCAG TGCTACGAAC CCATCCGGAC GTCCTCGACG TGGCGGTCGT ACCGCTGCCC
GATGCCGATC TCGGTGAAGA AGTCGCAGCC GCGGTCGTAC TAAGACATGG CGCAGCCATC
TCAAGCGAAG ATCTGCGCGC TTACGCATCC CGCGAACTCG GCAAATTTGA AGTACCGTCC
CGATGGTGGC TACGCCACGA TCCGCTGCCG ACCAATGCGT CGGGCAAGAC GATCAAACGC
GAAGTCATCG CCCGATGGCC AGCAAACGAA GCAACAGGAG TCATGCAATG A
|
|---|
| Protein sequence | MTIETTEAAP RWGTRVVQGI VAGHECKVYE QRPRSVAELL VDAQRWAERD FIVQGARRIT
GAQHAHAVAR VARMLREHGV RTRDPVVLLG YNHIEWLVTF WALQALGATA VLGNAWWSDT
ETTTVLETVR PTLVISDRAR ERFGPGDAGF ISFSELRPFV EAGEELPLDL TPVDEEWPAW
VIFSSGTTGH AKGVVMSHRS VIANIQNVLT LTGRLPSELP PSHRGTVSLV SMPLFHLAGI
QISLMSMLSG GKLVFLAGKF DPLEVLRLME RERVRSWGSV PTMVSRVIQH PDFGKYDTSS
VSSVQMGGAA VPHALRLEVQ QAFPNTRRRV GSMYGLTEAG GVLAAGSGDD LEGKPGCVGK
PLPSVEIVIR NPDAQGVGEI AARAPSATSG YLGDPTPIAD ADGWVLTGDL GRFDDAGYLY
IVGRSKDTII RGGENIASVH VESVLRTHPD VLDVAVVPLP DADLGEEVAA AVVLRHGAAI
SSEDLRAYAS RELGKFEVPS RWWLRHDPLP TNASGKTIKR EVIARWPANE ATGVMQ
|
|---|
| |