Gene Bxe_C0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0646 
Symbol 
ID4010160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp671036 
End bp672127 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID637953274 
Producthypothetical protein 
Protein accessionYP_555894 
Protein GI91780687 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0104627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.241315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCC GGACGCTGCA ACGCGCGGCA GCTGTCGGCC TGGCGCTCAT CGGCGCCTGT 
GTGCCCGGCC TCGCGGCCGG AAGCGGCAAA CCCGCTTTCG TCGATCCACT GGACGCTCCC
GCTGCGGTGG CCGTCTCGCC CGCACGCCAG CCGATGACAG CCGTCGCCTA TGCCGGCTCG
CGCCTCGTCG CGGTCGGCCA GCGGGGCGTC ATCGTCGTGT CGGACAATCG CGGCCAGACG
TGGCGCCAGG TGCCGAGCCC GGTGCAGAGC GACCTGACGG CCGTCACCTT TCCGAGCGCC
ACCGAGGGCT GGGCGGTCGG CCATGACGGC GTGATCCTGC ATTCCTCGAA CGGCGGCCAG
ACGTGGGTCA AGCAGCTCGA CGGGCGCATC GCGAATGCGC GCTTCGTCGC GTTCTATCGC
GCGGCGGCGG CATCGGGCAA CACGAACGCC GCTCCCCTGC TGCAGCAGGA GGAGCGCAAT
GCGAAAGCCG GGGCATCGCT GCCCTGGCTT GACGTATGGT TCGACACGCC GCAACGCGGC
TACGCGGTCG GCTCGTTCGG CATCGTCGCA GTCACCACCG ACGGCGGCAA GAACTGGCTG
CCCGGCCTCG AGTACGTCGA CAACCCCGAC TTCCTGAATC TCAACGCCAT TCGCGGCATC
AACGGTGACA TCTTCATCGC CGGAGAACGC GGCACGGTGT TCCGGCTCGA CCGGTCGAGC
GGCCGCTTCG AGCGCCTTTC GTCGGGCTAT ACCGGCAGCT TTTTCGGCAT CGCCGGAAAC
GGCAAGCGGC TTTTCGCTTT CGGCTTGCGC GGCACGGTCT ATGAAAGCAC CGATCGCGGC
GACACCTGGC AGCAGGCGCG CTCGGGCACC GACTCGTCGC TGAACGACGC CGCCACGCTC
GCCGATGGCA CCGTCGTGAT CTGCGGCAGC CGGGCGCTAT TGCTGGCAGG CGACCCGGTC
ACGGGCGAGC TGCGCCGCGT GTCGGCCGAT ACGCCGATGA TGTTCGCCGG CATCGCCACG
AACGGCGATG GACAGGTCGC GCTCAGCGGT TCGAGCGGCG TGATGATCGA ATCAATCCCG
GCGCGCCGGT AA
 
Protein sequence
MFIRTLQRAA AVGLALIGAC VPGLAAGSGK PAFVDPLDAP AAVAVSPARQ PMTAVAYAGS 
RLVAVGQRGV IVVSDNRGQT WRQVPSPVQS DLTAVTFPSA TEGWAVGHDG VILHSSNGGQ
TWVKQLDGRI ANARFVAFYR AAAASGNTNA APLLQQEERN AKAGASLPWL DVWFDTPQRG
YAVGSFGIVA VTTDGGKNWL PGLEYVDNPD FLNLNAIRGI NGDIFIAGER GTVFRLDRSS
GRFERLSSGY TGSFFGIAGN GKRLFAFGLR GTVYESTDRG DTWQQARSGT DSSLNDAATL
ADGTVVICGS RALLLAGDPV TGELRRVSAD TPMMFAGIAT NGDGQVALSG SSGVMIESIP
ARR