| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0642 |
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| Symbol | |
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| ID | 4010156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 665836 |
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| End bp | 666660 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637953270 |
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| Product | putative short-chain dehydrogenase/reductase |
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| Protein accession | YP_555890 |
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| Protein GI | 91780683 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0133584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0990143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG AGAAGGCCGG CGGCAAGCTG GAAAACAAGG TCGCGATCGT GACCGGCGCG
GGTGCGGGAC TCGGCGCCGC GTGCGCCCGC GCGCTGGCGC AACACGGCGC GCGCGTCGCG
GTCGTCGACA TCAACGGCGA AGCGGCCGCC GCCGTGGCGG CCGACATCGG CGAGCGCGCG
ATGAGCGTGC GTACCGACGT GTCGTCGGAG GCGCAGGTCA AGGCGATGGT GAGCGCCGTG
CTGGAACATT TTGGGCGCAT CGACATCCTG CACAACAATG CGGCTGTGCT CGACGACGCA
CAGCGGGCCG GCGACCGCGA TGTGATCAAC ATGAGCGTGG AAGTGTGGGA CCGGGCAATG
GCCGTGAATC TGCGCGGTGC CATGCTGTGC TGCAAGCATG CGATCCCGGC GATGCTGCGT
GGTGGAGGCG GCTCGATCAT TCACTCGTCC TCGGGCTTCG GCGCGCAGGG CGACTTTACG
ATGAGCGCCT ACGCAGCCTC CAAGGCGGGG CTCGCGATGC TGAGCAAGTC GGTGGCCGCG
CAGTACGGGA AAGAGCGCAT CCGCTCGAAC ACGATCCAGA TCGGCCTCGT GGTCGCGGAC
CATCCGCTTC CCGAGGACAT CAAGGGTGTG ATCCTCGACG GGCACCTCAC GCCCTATCTG
GGCGATCCGA AGCATGTCGC CGACGTCGTG TGCTTTCTCG CGTCGGACGA AGCGGCGTTC
ATCACCGGGG ACACGCTCGC GGTGGACGGC GGATTCTCGA GCCACGCGCC GACGCTCGCG
CCGCTGCGTG CCCTCTTCGC CGCCCGCGGC AAGGCAGCCT ATTGA
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| Protein sequence | MSNEKAGGKL ENKVAIVTGA GAGLGAACAR ALAQHGARVA VVDINGEAAA AVAADIGERA
MSVRTDVSSE AQVKAMVSAV LEHFGRIDIL HNNAAVLDDA QRAGDRDVIN MSVEVWDRAM
AVNLRGAMLC CKHAIPAMLR GGGGSIIHSS SGFGAQGDFT MSAYAASKAG LAMLSKSVAA
QYGKERIRSN TIQIGLVVAD HPLPEDIKGV ILDGHLTPYL GDPKHVADVV CFLASDEAAF
ITGDTLAVDG GFSSHAPTLA PLRALFAARG KAAY
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