Gene Bxe_C0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0625 
Symbol 
ID4010139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp649357 
End bp650130 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID637953253 
Productputative fumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_555873 
Protein GI91780666 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00700547 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAATCG CCCGCTATCG CCTGAACGAC GCCGTCCATT ACGGCGTGCT CGAAGGCAAG 
TCGCTGCAGC GCCTGAACGG CTCGCCATTT GCTTCGCTCA CGCCAGCCGG CCCGCGCGAT
GCGCTGGCCG ACGCGCAACT GCTATGTCCG CTGCCCGCGC CGCGGCTCTT CGCGGTCGGC
ATGAACTACG TCGGCCACAT TGCCGAAGCG GGCGCGAAAA CGCCCGTGAT TCCGCAGTTC
TTCATGATGC CGACGACAGC CGCCATCGGC CCCGGCGAAG CGATCGTCCG GCCGCGCGAG
GCGCAGGTCG TCCACCACGA GGCGGAGCTG GCGATTGTGA TCGGGCGCCG CGGGCGCCGC
ATCGACGTCG AGCGCGCGCT CGACCACGTG TTCGGCTATA CCTGCGCGAA CGACGTCAGC
GAACGGGTGA TCCAGAACCG CGAAATGGGC TACGGCTGCC TGCTCGTCGG CAAGGCGTTC
GACACCTTCT GCCCCCTCGG CCCCGTCATC GCGACGGGGC TCGACGCCGG CAACCTGCGC
GTGCGCGCCA GCGTGAACGG CTCGCCCAGA CAGGACGGCA ACACGTCCGA CCTGCTGTTC
ACCGTGCCTC ATATCGTGTC GTATCTGAGC CAGGCGGTAA CGCTGCTGCC CGGCGACGTC
ATCCTGACCG GCACGCCCTC GGGAGTCGGC CCGCTTCTAT CTGGAGACGT TTGCGAAATC
ACGATCGACG GGATCGGCAC GCTGTGCAAT CCCGTCATTG ACGAAGCCGC CTGA
 
Protein sequence
MKIARYRLND AVHYGVLEGK SLQRLNGSPF ASLTPAGPRD ALADAQLLCP LPAPRLFAVG 
MNYVGHIAEA GAKTPVIPQF FMMPTTAAIG PGEAIVRPRE AQVVHHEAEL AIVIGRRGRR
IDVERALDHV FGYTCANDVS ERVIQNREMG YGCLLVGKAF DTFCPLGPVI ATGLDAGNLR
VRASVNGSPR QDGNTSDLLF TVPHIVSYLS QAVTLLPGDV ILTGTPSGVG PLLSGDVCEI
TIDGIGTLCN PVIDEAA