Gene Bxe_C0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0589 
Symbol 
ID4010103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp606694 
End bp607473 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID637953217 
Productputative short-chain dehydrogenase/reductase 
Protein accessionYP_555837 
Protein GI91780630 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.398549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.212573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGG GAATCGACGG CCGCCGGGCG ATTGTCTGCG CGTCGTCGCG CGGTCTTGGC 
AAGGCTTGTG CGCTTGCCCT CGCGCGCGAG GGCTGCGAGG TGTTCATCAA CGGCCGTGAC
GAAGCGAGGC TCGGCCAGGC GGCGCGCGAG ATCGAGCAGG CCAGCGGGCG CCGTCCGACT
CCCGTCGTCG CCGATCTCGA CTCCGATGCG GGACGCGCCG CGCTGCTCGC CGCGTGTCCG
CAGCCTGACA TCCTCGTGAA CAACAATGCT GGCCCAGCGC CCGGCGAACT GGAGCAATGG
GATCACGCGG CGTGGCTGGC GGCGCTCGAG GCGAACCTGC TCGCGCCTAT CCTGCTGATG
TCCGCTGTCG TTCCCGGCAT GCGGACGCGC AAGTTCGGCC GCGTCGTCAA TATCACGTCG
GCGGTCGTCA AGTCGCCGCG CCTCGGCATG AGCCTGTCCA CGACCGCGCG CACCGGGCTG
ACCGCATTCG CCAAGGGCCT GTCACGCGAA GCGGTCGCCG ACAACGTCAC GATCAACAAC
CTGCTTCCCC AGCATATCGA CACGGACCGG CAGGAATACA TGGCCCGGCG GATCATGGAG
GACCGCGGGA TCACCTTCGC ACAGGCGCGC TCGCTTCAGG TGAAATCGGT GCGTGCGCGC
CGGCTCGGCA GGCCCGAGGA ATTCGGCGAC GCCTGCGCGT TTCTCTGTTC GGCACAGGCA
TCGTTCATCT CGGGACAGAA CCTGCAACTC GATGGCGGCT CGTATGACGG GCTGTTTTGA
 
Protein sequence
MDLGIDGRRA IVCASSRGLG KACALALARE GCEVFINGRD EARLGQAARE IEQASGRRPT 
PVVADLDSDA GRAALLAACP QPDILVNNNA GPAPGELEQW DHAAWLAALE ANLLAPILLM
SAVVPGMRTR KFGRVVNITS AVVKSPRLGM SLSTTARTGL TAFAKGLSRE AVADNVTINN
LLPQHIDTDR QEYMARRIME DRGITFAQAR SLQVKSVRAR RLGRPEEFGD ACAFLCSAQA
SFISGQNLQL DGGSYDGLF