Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0589 |
Symbol | |
ID | 4010103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 606694 |
End bp | 607473 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637953217 |
Product | putative short-chain dehydrogenase/reductase |
Protein accession | YP_555837 |
Protein GI | 91780630 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.398549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.212573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGG GAATCGACGG CCGCCGGGCG ATTGTCTGCG CGTCGTCGCG CGGTCTTGGC AAGGCTTGTG CGCTTGCCCT CGCGCGCGAG GGCTGCGAGG TGTTCATCAA CGGCCGTGAC GAAGCGAGGC TCGGCCAGGC GGCGCGCGAG ATCGAGCAGG CCAGCGGGCG CCGTCCGACT CCCGTCGTCG CCGATCTCGA CTCCGATGCG GGACGCGCCG CGCTGCTCGC CGCGTGTCCG CAGCCTGACA TCCTCGTGAA CAACAATGCT GGCCCAGCGC CCGGCGAACT GGAGCAATGG GATCACGCGG CGTGGCTGGC GGCGCTCGAG GCGAACCTGC TCGCGCCTAT CCTGCTGATG TCCGCTGTCG TTCCCGGCAT GCGGACGCGC AAGTTCGGCC GCGTCGTCAA TATCACGTCG GCGGTCGTCA AGTCGCCGCG CCTCGGCATG AGCCTGTCCA CGACCGCGCG CACCGGGCTG ACCGCATTCG CCAAGGGCCT GTCACGCGAA GCGGTCGCCG ACAACGTCAC GATCAACAAC CTGCTTCCCC AGCATATCGA CACGGACCGG CAGGAATACA TGGCCCGGCG GATCATGGAG GACCGCGGGA TCACCTTCGC ACAGGCGCGC TCGCTTCAGG TGAAATCGGT GCGTGCGCGC CGGCTCGGCA GGCCCGAGGA ATTCGGCGAC GCCTGCGCGT TTCTCTGTTC GGCACAGGCA TCGTTCATCT CGGGACAGAA CCTGCAACTC GATGGCGGCT CGTATGACGG GCTGTTTTGA
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Protein sequence | MDLGIDGRRA IVCASSRGLG KACALALARE GCEVFINGRD EARLGQAARE IEQASGRRPT PVVADLDSDA GRAALLAACP QPDILVNNNA GPAPGELEQW DHAAWLAALE ANLLAPILLM SAVVPGMRTR KFGRVVNITS AVVKSPRLGM SLSTTARTGL TAFAKGLSRE AVADNVTINN LLPQHIDTDR QEYMARRIME DRGITFAQAR SLQVKSVRAR RLGRPEEFGD ACAFLCSAQA SFISGQNLQL DGGSYDGLF
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