| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0580 |
|---|
| Symbol | |
|---|
| ID | 4010094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 598766 |
|---|
| End bp | 600028 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637953208 |
|---|
| Product | major facilitator superfamily (MFS)transporter |
|---|
| Protein accession | YP_555828 |
|---|
| Protein GI | 91780621 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.104096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.348152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCT CCCGTCGTTC CCGTCTTACG GCAATCGATC CCGGTGAGTT CCTCGGCGCC
TGGCGCATCG TGCTGGTCGC GGTGCTCGGG CTGGGCGTGT CGGCCAGCGC GTCCCTGCTC
TATTCGTTCG GCGCACTGGT GATTCCCTTG CAGCACGCAT TCGGATGGAG TCGCGCGGAA
TTGCAACCGG CGATCAGTTG TCTGTTCGCC GGCACGATCG TCAGCACGCA AGCGGTCGCC
AGCCTCAACG CGCGTTTCGG CATGCTGCGC GTCACGGCGC TCTCGCTCGT CGGCATGGGG
CTCTGCTACG CGCTGATGAC GCAGCTCGGC CATTCGATCG GCTGGCTCTA TCTGATGTGC
GTGCTCCTGC CGCTCGCCGG AGCGGGTGCG ACACAGGTCA CGTGGGCGCA TCTCATCATC
CTCTGGTTCT CGCGCAATCG CGGTCTCGCG CTGGCCGCGA TGCTGTCCGG CACCGGGTTA
GCGGCGATGG TCTATCCGTC CGCCGTTACA TGGGCCATCT CGCGCTGGCA CTGGCAAGGC
GGCTTCGTGC TGCTCGCCCT CGCGCCGCTC GCCGTCCTGC CTCTGGCGAT GGCCTGGATG
AGGGTGCCCG TGCCACGCCC GGCCGCAATA GCGGTCGCCG CACCGATCCG CAGCGAAGAA
GGCGTGTGCT TTCGGACCGC CGTGCTGTCG ACGCGCTTCT GGACGCTCAA CATTGCGCTC
GCGCTCGTTG TCGCCGCCGT CGTCGCGATG ATAAGCAACA CCGTGCCGCT GCTTTGCGAC
AAGGGGCTTT CCGCCGCCGG GGCGAGTCGC ATATTCGGCA GTTTCGGCGT CTCGTTGATC
GTCGGCCGGC TGATCGTCGG CTATCTGTTC GACCGGCTGT GGGCGCCCGG TGTCGCCGCC
GTGACGCTCG CCATCCCGGC GTTCGGCTGC GTGCTGCTCA GCAGCGCAGC AGCATCGCAG
ACCGGCTTGC TGACGCTTGC CACGATGCTC GTCGGCGTGG GTGCCGGCGC CGAGTTCGAC
ATCGGCGCCT ATCTCGTCTC GCGCTACTTC GGGATGCGTG ACTACGGCCG CCTGTTCGGC
GTGCACGTCT CCCTGATCAC CGCGGCCGCG GCGCTCGCTC CGTGGTGCTC CGCCAGGCTC
TATGCGTCGA CCGGTACCTA CGCGGCGATG GTAGCGGCTT GCGGCGCGGC GTTCCTGTGC
GGCGCACTGC TGTTGCTGCC GCTCGGCCGC TATCCGAAGT TCGATCCAGT CACCCTTGCA
TAA
|
|---|
| Protein sequence | MPRSRRSRLT AIDPGEFLGA WRIVLVAVLG LGVSASASLL YSFGALVIPL QHAFGWSRAE
LQPAISCLFA GTIVSTQAVA SLNARFGMLR VTALSLVGMG LCYALMTQLG HSIGWLYLMC
VLLPLAGAGA TQVTWAHLII LWFSRNRGLA LAAMLSGTGL AAMVYPSAVT WAISRWHWQG
GFVLLALAPL AVLPLAMAWM RVPVPRPAAI AVAAPIRSEE GVCFRTAVLS TRFWTLNIAL
ALVVAAVVAM ISNTVPLLCD KGLSAAGASR IFGSFGVSLI VGRLIVGYLF DRLWAPGVAA
VTLAIPAFGC VLLSSAAASQ TGLLTLATML VGVGAGAEFD IGAYLVSRYF GMRDYGRLFG
VHVSLITAAA ALAPWCSARL YASTGTYAAM VAACGAAFLC GALLLLPLGR YPKFDPVTLA
|
|---|
| |