| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0570 |
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| Symbol | |
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| ID | 4010084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 590521 |
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| End bp | 591621 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637953199 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_555819 |
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| Protein GI | 91780612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000000938723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.683282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCT ATTTATTTTT GTTTCTCGCT GTTCTGGCCG CTGACGTGCA TGCACAAAGC
AGCATTACGC TCTATGGTGT GATTGACGAC GGTATAAATT ACGTCACTAA CGAAAACGGA
CATTCGGCCT GGCAGATGGC GAGTACCGTT ATGCAGGGGG AGCGGATAGG ATTTAGAGGC
GTCGAAGACC TCGGTGGCGG TGTAAAGGCG ATATTTACCC TGGAGGACGG TTTTGACGTG
AATAGTGGGG GGTTGCTGCA GGGGAAGAGG CTTTTCGGCC GGCAGGCATT TGTCGGATTA
AGTTCCGACG TTGGCACGAT TACGTTGGGC CGCCAGTATG ACCCAACGGT AGATTATGTC
CAACCGCTCA GTAACAACGC TTTCTATGCT TCCTATGGGG GGCATCCGGG TGACAATGAT
AATCTGCAGG ACAACTTTCG CATCAACAAT GCTGTAAAGT TCAAAAGTGC TACATACCAT
GGAGCTAGTT TCGAGGCGAT GTACGCGTTC AGCAATGCAG CTGGCGCCTT CAGCGGAAAT
AGCGCCTGGA GCCTTGGTAC TGGATACAGC CAGGGGCCGA TTTCCGCAGG CGCTGGCATC
CTGAAGCTAA ATCATCCGGC GTCGAACACC AGCGGTGCGG TCGGCAGTTC GGGTGAGGGT
ATCGGGTCCG ATTACGTCTC GTTTGCAAAT ACATTTGTGG CGGGCACTGT AAATGATGAA
ATCATAGCGG ACGGCGGCAT CAACTATCTG TTTTCGAAAG GGTCGGTCGG TGTAGTGATT
TCTCATGTTT TGTACGACCT GTCGGTTTCC AGGGTGACAT TCAATAACTA TGAACTGAAC
GCAAGCTACT TTTTTACCCC GGCCCTGCGT CTTGCGGGTA GTTATACCTT CACGGACGGA
CGCGTACCCG TCATCCATGA GAGCCCGAAA TATCATCAGT TGTCGTTTGC GCTGGATTAT
TTTTTATCGA AACGCACCGA TGTTTATGTA ATGCTCGCTG CCCAGAAAGC CATCGGCACG
TTTGCAGACA TCATTGACAT TGCTCCCTCC AATAGCGACA AACAGCTCGT TGCCAGACTC
GGTATGCGGG TGAAATTCTG A
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| Protein sequence | MKSYLFLFLA VLAADVHAQS SITLYGVIDD GINYVTNENG HSAWQMASTV MQGERIGFRG
VEDLGGGVKA IFTLEDGFDV NSGGLLQGKR LFGRQAFVGL SSDVGTITLG RQYDPTVDYV
QPLSNNAFYA SYGGHPGDND NLQDNFRINN AVKFKSATYH GASFEAMYAF SNAAGAFSGN
SAWSLGTGYS QGPISAGAGI LKLNHPASNT SGAVGSSGEG IGSDYVSFAN TFVAGTVNDE
IIADGGINYL FSKGSVGVVI SHVLYDLSVS RVTFNNYELN ASYFFTPALR LAGSYTFTDG
RVPVIHESPK YHQLSFALDY FLSKRTDVYV MLAAQKAIGT FADIIDIAPS NSDKQLVARL
GMRVKF
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