Gene Bxe_C0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0499 
Symbol 
ID4010013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp514928 
End bp515788 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content52% 
IMG OID637953130 
Productbranched chain amino acid ABC transporter inner membrane protein 
Protein accessionYP_555750 
Protein GI91780543 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0809896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TCGTTATCGG TCTGAGCATC GGAATGCTCC TATTTTTGCT TGCTTCCGGG 
TTGACAGTCA TTTTCGGAAC ATTGGGTGTA GTGAATTTCG CTCATGGCGC GATGTATTCG
TTTGGTGCAT ACCTGACGTG GCAAGCGATC TCATGGACAA ACAGCTTCTG GCTCGGCCTT
GCATTTGCAC CGCTTGTTAT GGCCGCAGTC GGGTTTGTGT TCGAAATTCT GTGTCTGAGA
AAAACTTATT CTCGCGATCA TGTTCTGCAA TTACTTGTGA CATTCGGACT CGTTCTTATT
TTAGAAGAGG TGGCAAAGGT CATTTGGGGC CTCGATTACA AGAATGTATC GACTCCGGGC
ATACTGGCGG GAACATGGAG CGTGGCAGGT ACTGAAGTCG CAATATATCG CCTGTTCGTC
ATCGCATTTG GGAGTGTCAT CTCCTTTGCG TTGTTTGCCG TGATAGATCA CAGCCGTGCG
GGAATGATTT TGCGCGCTGC TGAGACACAT GCTCCCATGG TTCGATGTAT GGGTATCAAG
GTCGATTGGG TCCGAACTGC AGTCTTTGCC GTAGGATCGG GTCTCGCCGC GTTGGGGGGG
GCCATTGCGT CGCCTTTACT TCCTGTTCAG CCCGGAGCCG GCTTCACCAT CATCATCGAT
AGCTTCCTCG TGGTTCTGAT CGGAGGCCTG GGTAATATAC GTGGAGCCAT CTTCAGTGCG
CTTGCTATTG GCATGGGAAG GGCCCTGGGT CAAAGGTGGC TGCCGGATTG GGTAGATATC
CTTACTTACG CGATACTTGT CGGCGTACTC ATGCTGTCGC CGCAAGGTCT GTTTAGTCGT
GGGCCGGGGA GGAAGGGATG A
 
Protein sequence
MSTIVIGLSI GMLLFLLASG LTVIFGTLGV VNFAHGAMYS FGAYLTWQAI SWTNSFWLGL 
AFAPLVMAAV GFVFEILCLR KTYSRDHVLQ LLVTFGLVLI LEEVAKVIWG LDYKNVSTPG
ILAGTWSVAG TEVAIYRLFV IAFGSVISFA LFAVIDHSRA GMILRAAETH APMVRCMGIK
VDWVRTAVFA VGSGLAALGG AIASPLLPVQ PGAGFTIIID SFLVVLIGGL GNIRGAIFSA
LAIGMGRALG QRWLPDWVDI LTYAILVGVL MLSPQGLFSR GPGRKG