Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0454 |
Symbol | |
ID | 4009968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 474185 |
End bp | 475021 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637953088 |
Product | putative type IV secretion system protein VirB9 |
Protein accession | YP_555708 |
Protein GI | 91780501 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGA ACACTCTGGT GAGAGCCGCC GCGCTGGTGG CAGGACTGGT GGGGAGCTGC GCCGGCGCCT TTGCCTACGA CATGCCTGGC TGGTCGGGCG ACTCCCGCGT GCGGCAGGTC GTGTACCGGC AGGACGAGGT GGTGCGGGTC ATCGCGCAAC GCGGCTTTGC CACGCACATT GCGCTGGATC CGGCCGAGCA CATCCTCGTC GTAGCCCCGG GCGACCGGGA CGGATGGCAG GTGGTCGCAA ACCGTGGCGA CCACGACGTC TACCTCAAGC CGCAGCTTGC TGCGCACGAC ACGAACCTCG AAATCCGGAC GGACCGGCAC AGCTACAGCT TCGACCTGGT CGTACTGCCG CTGAAGGCCC GTTTCGGTAG CGACGACGAG ATGTACCGGA TCACGTTCGT CTATCCGGAC ATGCAAGCCG CGAAGACAAA GGCCGCAGAC GATGCCGTCC TCCTGCGCAA GCGTCTCGAC CAGGCGCCGG TGGTGCGCAA CACCGCTTAC TCGATGCAGG TGATGCCGCA CTCGGAGGAT ATCGCGCCGA CGGCGGCATG GGATGACGGG CGCTTCACCT ACATCCGCAT TCCGAACAAC CGCCGTATCC CGGCGATCTT CCGCGTCGCC GATGACAGCA GCGAAAGCGT GGTTGACCGG CACATGGAAG CCGACGTGAT CGTCGTGCAT GAGGTGGCCC GGCGGTTCGT CCTGCGGTTG GGCGACGAGG TGGTCGGTCT GTGGAACGAC GCGTTCGATG TAGATGGCGT GCCACCGGCG GATGGCACGA CGGTCAGCGG TGTGAAGCGT GTTTTGCGGA GCGACGGCCA TGAATGA
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Protein sequence | MRLNTLVRAA ALVAGLVGSC AGAFAYDMPG WSGDSRVRQV VYRQDEVVRV IAQRGFATHI ALDPAEHILV VAPGDRDGWQ VVANRGDHDV YLKPQLAAHD TNLEIRTDRH SYSFDLVVLP LKARFGSDDE MYRITFVYPD MQAAKTKAAD DAVLLRKRLD QAPVVRNTAY SMQVMPHSED IAPTAAWDDG RFTYIRIPNN RRIPAIFRVA DDSSESVVDR HMEADVIVVH EVARRFVLRL GDEVVGLWND AFDVDGVPPA DGTTVSGVKR VLRSDGHE
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