Gene Bxe_C0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0454 
Symbol 
ID4009968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp474185 
End bp475021 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID637953088 
Productputative type IV secretion system protein VirB9 
Protein accessionYP_555708 
Protein GI91780501 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA ACACTCTGGT GAGAGCCGCC GCGCTGGTGG CAGGACTGGT GGGGAGCTGC 
GCCGGCGCCT TTGCCTACGA CATGCCTGGC TGGTCGGGCG ACTCCCGCGT GCGGCAGGTC
GTGTACCGGC AGGACGAGGT GGTGCGGGTC ATCGCGCAAC GCGGCTTTGC CACGCACATT
GCGCTGGATC CGGCCGAGCA CATCCTCGTC GTAGCCCCGG GCGACCGGGA CGGATGGCAG
GTGGTCGCAA ACCGTGGCGA CCACGACGTC TACCTCAAGC CGCAGCTTGC TGCGCACGAC
ACGAACCTCG AAATCCGGAC GGACCGGCAC AGCTACAGCT TCGACCTGGT CGTACTGCCG
CTGAAGGCCC GTTTCGGTAG CGACGACGAG ATGTACCGGA TCACGTTCGT CTATCCGGAC
ATGCAAGCCG CGAAGACAAA GGCCGCAGAC GATGCCGTCC TCCTGCGCAA GCGTCTCGAC
CAGGCGCCGG TGGTGCGCAA CACCGCTTAC TCGATGCAGG TGATGCCGCA CTCGGAGGAT
ATCGCGCCGA CGGCGGCATG GGATGACGGG CGCTTCACCT ACATCCGCAT TCCGAACAAC
CGCCGTATCC CGGCGATCTT CCGCGTCGCC GATGACAGCA GCGAAAGCGT GGTTGACCGG
CACATGGAAG CCGACGTGAT CGTCGTGCAT GAGGTGGCCC GGCGGTTCGT CCTGCGGTTG
GGCGACGAGG TGGTCGGTCT GTGGAACGAC GCGTTCGATG TAGATGGCGT GCCACCGGCG
GATGGCACGA CGGTCAGCGG TGTGAAGCGT GTTTTGCGGA GCGACGGCCA TGAATGA
 
Protein sequence
MRLNTLVRAA ALVAGLVGSC AGAFAYDMPG WSGDSRVRQV VYRQDEVVRV IAQRGFATHI 
ALDPAEHILV VAPGDRDGWQ VVANRGDHDV YLKPQLAAHD TNLEIRTDRH SYSFDLVVLP
LKARFGSDDE MYRITFVYPD MQAAKTKAAD DAVLLRKRLD QAPVVRNTAY SMQVMPHSED
IAPTAAWDDG RFTYIRIPNN RRIPAIFRVA DDSSESVVDR HMEADVIVVH EVARRFVLRL
GDEVVGLWND AFDVDGVPPA DGTTVSGVKR VLRSDGHE