| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0450 |
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| Symbol | |
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| ID | 4009964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 468909 |
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| End bp | 471380 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637953084 |
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| Product | putative Type IV secretion system protein VirB4/TraE |
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| Protein accession | YP_555704 |
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| Protein GI | 91780497 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.228216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAC AGCCGCAACT CATCGAGGTG GCCGAACGTG AGGTGGTGCT CGCGGACTTT
GTCCCGTTTT CGTCGCACGT GACCGATCAC GTGATCCGCA CGCGGGAAGG GGATTACCTG
AGTGTCTGGA AGATCGCGGG CATTGCCTTC GAGGCGGCCG ATCCAGGCGA CATCCTCGTG
CGTCACGAAG GATTCAACCA GCTCGTGCGC AGCCTGCCGG GAGGTCACGT CGGCCTGTGG
TCGCACCGGA TCCGCCGGCG CGTGACGGAC CACTTTGCGA CGCCGTACGG CCACCCGTTC
TGCCAGGAGC TCGCCACGCG CTACTACGCG AGCTTTGCGG GCTACCGGAT GATGGCCAAC
GAACTGTACC TGACGCTCGT GTACCGGCCG CGCCGCACGC GCCTGGGGCG TCTTTTCAGC
CAGGCGGCGC GGCGGACCCT CGATGATATT CGGCGGGACC AGCACGAGGC CCTGAAGGTG
ATGGCGGAGC TTGCCGCGCA GGTCGAATCG GGCCTTAAGC CCTGGGACCC GGTGGCGCTT
GGTGTCTACA GGAAGCAGAT CCGCTACACG CAGCGCCCCG TGCGTTTCTC CGCGGCGCTG
GAGTTCCTGG GCTATCTCGT CAACGCCGCA TGGGAGCCCG TGCCGGTGCC GTCTGGCCGC
ATTGCCGAGG CACTGCCGAC GTCGCGGCTT TTCTTCCGCA CCGAGAAGGT CGAGATCCGC
ATGGCCGATG CGACGCGCTA CGCCGCGTTG CTCGACCTGA AGGACTACCC CGAGGAAACC
GAGCCGGGGA TGCTCGACGG TCTGCTCTAT GGCGACTTCG AATACATCGA GACCCAGAGT
TTCACGATCC TTGACCGTCC CACGGCAAAA GAGGCACTCG AGCGTCAGCG CAACCAGATG
ATTGCTGGCG AGGACGTGGC GGTCTCGCAG GTCCAGGCTA TGGACCAGGC GCTGGACGAT
CTGATCAATG GTGATTTCGT CCTCGGTGAA TATCACTATT CGCTCGCGGT GCTCGGTGAC
AGGCCCGACG AGGTCGCGCG GCATGTGGCG AAGGCGCGCA CACAACTCGC GGACGTGGGC
TTCCAGACGG CGCTGGTCGA TCTGGTAGCG GATGCGGCCT GGTTCGCGCA GCTGCCTGGT
AACTGGCGCT ACCGGCCACG GGAGGCGAAG CTCACCTCGC GCAACTTCTG CGGACTCGCG
AGCCTGCACA ACTTTGCGAC CGGCAAGCGC GAAGGCAATC CGTGGGGCGA GGCGATCACG
ATCGTGAAGA CGCCGAGTGG GCAACCGCTG TACCTGAACT TCCACGCCAC GCCGGAGAAG
AAGGAGTCCG CTGACGAGAA GGCGCTCGCC AACACGCAGA TCATCGGACA GGCGGGTGCC
GGCAAGACGG TGTTGGAGCT GTTCCTGCTG GCAATGGCGA TGAAGTATGG CCTCACCGGC
GTCGTCTACG ACAAGGACCG GGGCACTGAG ATCGCGATCC GGGCGATGGG AGGCCGCTAC
ACGGTGTTTC GACGGGGTGT CCCGACGGGA TTGAATCCGT TCCAGCTCGA CCCGGACGAG
ACGGTACTGG ACTTCTGGGA GCGGCTCGTG CGCCGTCTGG TCGACACCGG CACGCTGTTG
TCGGCGAAGG ACGAACTCGA CATTTCGCGT GCAGTGCGGG AAGTCGCCCG CATGGAGCGC
CCGTTGCGCC GCCTGTCGAT GGTCCGGCAA TTGCTGCCCG CCGTGGGCGA AAACAGCCTG
CATGCACGCC TCACGAAGTG GTGCGCAGGC GGACGACTCG GCTGGGTGCT GGACAACCCG
TCGGACCTGC TGGATTTCAG CCAGAACCGT CTCTTCGGCT TCGACGATAC GGAGCTGCTC
GACGATCCGG AGGTGTCGAC GCCGGTCACG ATGTACCTGT TGCAGCTGAC CGAAAGCCTG
ATCGACGGGC GGCGCTTTGT GTATGTGATG ACCGAATTCT GGAAGCGCCT GGGCGATCCG
GTCTTCACGG ATTTCGCAAA GGACAAGCAG AAGACGATCC GCAAGCAGAA CGGTCTGGGG
ATCTTCGACA CGCAATCCCC AGCCGATGTA CTGCGTAGCG ACATCGCGCG GGCGCTGGTC
GAGCAGACCG CCACGTTCTT CTTTCTGCCG AATCCGCGTG CCGACTACGA CGACTACGTG
CATGGCTTCA AGCTGACCGA GGCCGAATTC AACATCGTCC GCTCACTCGG CGAGAACAGT
CGCCTGTTCC TTGTGAAGCA GGGCCACCGT TCGGCCATCG GCAGGCTGGA TCTGGCCGGC
CTCGGTGACG TGCTCGACGT GCTGTCGGGG ACGACGGACA ACGTTGAGCT GCTCGACGGG
ATCCGTGCCG AAGTGGGCGA CGATCCCGGC GTGTGGCTCC CCGTGTTTCA TGAGCGGCTG
GCGAAGCGTC GTGCGACCGG GGGCGCCCTG AATGCACTGA CGCCGCGTCT GTCGGGAAGA
GGTGCACGAT GA
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| Protein sequence | MSAQPQLIEV AEREVVLADF VPFSSHVTDH VIRTREGDYL SVWKIAGIAF EAADPGDILV
RHEGFNQLVR SLPGGHVGLW SHRIRRRVTD HFATPYGHPF CQELATRYYA SFAGYRMMAN
ELYLTLVYRP RRTRLGRLFS QAARRTLDDI RRDQHEALKV MAELAAQVES GLKPWDPVAL
GVYRKQIRYT QRPVRFSAAL EFLGYLVNAA WEPVPVPSGR IAEALPTSRL FFRTEKVEIR
MADATRYAAL LDLKDYPEET EPGMLDGLLY GDFEYIETQS FTILDRPTAK EALERQRNQM
IAGEDVAVSQ VQAMDQALDD LINGDFVLGE YHYSLAVLGD RPDEVARHVA KARTQLADVG
FQTALVDLVA DAAWFAQLPG NWRYRPREAK LTSRNFCGLA SLHNFATGKR EGNPWGEAIT
IVKTPSGQPL YLNFHATPEK KESADEKALA NTQIIGQAGA GKTVLELFLL AMAMKYGLTG
VVYDKDRGTE IAIRAMGGRY TVFRRGVPTG LNPFQLDPDE TVLDFWERLV RRLVDTGTLL
SAKDELDISR AVREVARMER PLRRLSMVRQ LLPAVGENSL HARLTKWCAG GRLGWVLDNP
SDLLDFSQNR LFGFDDTELL DDPEVSTPVT MYLLQLTESL IDGRRFVYVM TEFWKRLGDP
VFTDFAKDKQ KTIRKQNGLG IFDTQSPADV LRSDIARALV EQTATFFFLP NPRADYDDYV
HGFKLTEAEF NIVRSLGENS RLFLVKQGHR SAIGRLDLAG LGDVLDVLSG TTDNVELLDG
IRAEVGDDPG VWLPVFHERL AKRRATGGAL NALTPRLSGR GAR
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