| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0374 |
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| Symbol | |
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| ID | 4009888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 398551 |
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| End bp | 400629 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637953011 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_555631 |
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| Protein GI | 91780424 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00720361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATTCCTG AAATCGGGCA CTTTGCGCTG ATCCTCGCGT TGCTGCTCGC ACTCACGACT
GGTGTACTGC CGGTGATCGG TGTGCAGCGC GGCATCGATG GCTGGATACG TCTTGCCTGG
CCGGCGGCGC GCGCGCAGTT TGCTTTCGTC GCGATTGCTT TTGGCTGTCT GTCATGGTCG
TTCCTCATCA ATGACTTTTC CGTCCTCTAC GTGGTGGAGA ACTCGAATTC CGCGTTACCC
GCCGTCTATC GTTTTACTGC GGTCTGGGGC GGTCATGAAG GCTCGCTGCT GCTGTGGGTG
TTGCTGTTGA CGCTTTGGAT GGTGGCCGTC ACCTGTTTCA GCAAGCAATT GCCGGTGACG
ATGGTGGCCA CGGTACTGGG TGTGATGAGT TGGATTGCGA GTGGCTTTTT GCTGTTCATG
CTCTTCACGT CGAACCCATT CAGCCGCCTG ATTCCGCAGT CCATGGAGGG CCGCGATCTG
AATCCGCTGC TGCAGGACCC TGGCATGGTC ATTCATCCGC CGGTGCTCTA CGCGGGCTAC
GTCGGTTTCT CGGTGGCTTT CGCATTTGCG ATTGCGGCGT TGCTGTCGGG CCGGCTTGAC
GCGGCATGGG CACGCTGGTC GCGCCCGTGG ACCACGGCCG CCTGGGTGTT CCTGACGCTG
GGCATCATGC TGGGCAGCGG CTGGGCTTAC TACGAACTTG GCTGGGGCGG ATGGTGGTTC
TGGGATCCGG TCGAAAACGC TTCATTCATG CCGTGGCTGG CGGGTACGGC CTTGATCCAT
TCGCTCGCGG TCACGGAGAA GCGCGGCAGC TTCCGCAGTT GGACCGCTTT GCTGGCGATC
TGCGCGTTTT CGTTGAGCCT GCTAGGCACG TTCCTCGTGC GTTCCGGCGT GATTACCTCG
GTCCATGCAT TTGCGTCCGA TCCGACCCGC GGCGTGTTCA TCCTCGGGTT TCTTGCGCTG
GTGGTGGGTG GCGCGCTGCT TCTCTTTGCC TGGCGCGCGC CGCAGATCGG CCTGGGGGCC
GGCTTTGAGC CCGTGTCGCG GGAGGCCTTG CTGCTGTCGA ACAATGTGCT GTTAATGGTG
GCTGCCGCGT CGGTGCTGCT CGGCACGCTT TATCCGATGG TGCTGGATGC ACTTGGACTC
GACAAGATTT CGGTCGGGCC GCCGTATTTC GACAGCGTGT TCGTGCCGTT GATGACGCCG
GCTATCTTTC TGATGGGCGT GGGACCGCTT GCCCGCTGGA AGGCGGCTCG CGTGCCCGAT
CTCGCGGCGC GCCTGCGCTG GGCCGCGGCG GTCAGCGTCG TCACAGCGCT GGCGCTGCCG
TTCACGCTCG GCAGTTGGCG GCCGCTCGTC AGTCTTGGCC TGCTGCTCGC GACCTGGAGC
TTCGCGACGG TCGCGGTGAG CATGCGTGAG CGCATCGGTA GCCAGCAGGG CCGTCCTCTT
CTGCGATTCA GGCGCGTACC GCGGGCGAGC TACGGCATGT GGCTCGCGCA CGCTGGGATC
GGTGTGTTTA TCGTGGGTGT GACGCTGGTC AAAGGTTACG AGTCGGAGCG CGATGTGCCG
ATGCGCAGGG GCCAGACCGT CGAGGTTGGC GGCTACCAGT TCCGTTTCGA CGGGGTCCGC
GATGTCGACG GGCCGAACTA CCGTGCGACG CGCGCCTCGA TCGCAGTGAG TCGCGAGGGG
CGACCGGTTA CGACGCTCTA TCCGGAGAAG CGTCTTTTTC TCGTGCAGAA GATGCCCATG
ACCGAGGCTG CGATCGACCA CGGCGTGCTA CGCGATCTGT ACGTGGCAAT GGGCGAGCCG
ATTGGCGAGG AAGCATGGAC CTTGCGGATC CAGATCAAGC CATTCGTTCG CTGGATCTGG
GCGGGTTGCC TGCTGATGGC ATTGGGCGGA ATGCTTGCCG CCAGCGACCG GCGATATCGG
TTGTTTCCGG GCCGGCGCGT GCTGCAGATG AACGAGGCTG CGCGTAGTGC TGGAGTGCGG
CCCCTTGCTG CAAACGAAAT TCGCCAAACC GGCGCGATCG GAGCGCCGGG CGTGATAGCT
GCCGCGCCAC ACCATCCCGT CAACGAGGAC CGCGGATGA
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| Protein sequence | MIPEIGHFAL ILALLLALTT GVLPVIGVQR GIDGWIRLAW PAARAQFAFV AIAFGCLSWS
FLINDFSVLY VVENSNSALP AVYRFTAVWG GHEGSLLLWV LLLTLWMVAV TCFSKQLPVT
MVATVLGVMS WIASGFLLFM LFTSNPFSRL IPQSMEGRDL NPLLQDPGMV IHPPVLYAGY
VGFSVAFAFA IAALLSGRLD AAWARWSRPW TTAAWVFLTL GIMLGSGWAY YELGWGGWWF
WDPVENASFM PWLAGTALIH SLAVTEKRGS FRSWTALLAI CAFSLSLLGT FLVRSGVITS
VHAFASDPTR GVFILGFLAL VVGGALLLFA WRAPQIGLGA GFEPVSREAL LLSNNVLLMV
AAASVLLGTL YPMVLDALGL DKISVGPPYF DSVFVPLMTP AIFLMGVGPL ARWKAARVPD
LAARLRWAAA VSVVTALALP FTLGSWRPLV SLGLLLATWS FATVAVSMRE RIGSQQGRPL
LRFRRVPRAS YGMWLAHAGI GVFIVGVTLV KGYESERDVP MRRGQTVEVG GYQFRFDGVR
DVDGPNYRAT RASIAVSREG RPVTTLYPEK RLFLVQKMPM TEAAIDHGVL RDLYVAMGEP
IGEEAWTLRI QIKPFVRWIW AGCLLMALGG MLAASDRRYR LFPGRRVLQM NEAARSAGVR
PLAANEIRQT GAIGAPGVIA AAPHHPVNED RG
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