Gene Bxe_C0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0373 
Symbol 
ID4009887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp398066 
End bp398554 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID637953010 
Productputative cytochrome c-type biogenesis protein CcmE 
Protein accessionYP_555630 
Protein GI91780423 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00440688 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACCTA GAAGCTGGCG TCTCGTCTGG GTCGTCGGCG GCGTAGCTGT CGCGGGACTC 
GCCTGCGCGC TCGTGCTGAA CGCCTTCCGG GCCAACGTCG TGTTTTTCGT CAGTCCGAGC
CAGATTGCGG CGCAGGAGAT ACCGGTGACG CGGCACTTTC GTCTGGGTGG CCTTGTCGAG
CGGGGCTCGC TCAGGCGCGA CGGCGACGGT TTGACCGTGC ACTTCGTGGT GACCGATACC
GCAACGGAGA TCGCGGTGAT CTATCACGGC GTGTTGCCGG ACCTGTTTCG CGAAGGCAGC
GGCGTCGTTG CGCAAGGCAC GCTAGGCGGT GACGGTCAGT TCCATGCCGA TCAGGTGCTT
GCCAAACATG ACGAGAAGTA CCAACCGCCG GAAGTCAGCG GCGCGTTGCG CCGCGCACAA
GGCGGCCGGC AAGGATTGAC CACGCTGCAC GCCGCTGCCG GCAGGACTGA AGGAGGAACC
GGGCCTTGA
 
Protein sequence
MRPRSWRLVW VVGGVAVAGL ACALVLNAFR ANVVFFVSPS QIAAQEIPVT RHFRLGGLVE 
RGSLRRDGDG LTVHFVVTDT ATEIAVIYHG VLPDLFREGS GVVAQGTLGG DGQFHADQVL
AKHDEKYQPP EVSGALRRAQ GGRQGLTTLH AAAGRTEGGT GP