Gene Bxe_C0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0231 
Symbol 
ID4009564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp251408 
End bp253723 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content61% 
IMG OID637952885 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_555505 
Protein GI91780298 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGAA GAAAATATAA CAAGCGAACC ACCGGGAGTT TGCGATACGA CGCGGCAGTG 
CTGCAATGCG GGCGTGAGTC CGGACGTTTC GCGTTGAACG CCGGTGCGAT GAAATTGCTG
CCGTTCTCGC TGATTTCAGC CCTCGCAACA GGATTCGCGC ACGCGCAGGA GCCAACGGCG
GCGCCGTCGG CTGCAAGCTC CACCACGGCT GCGACACCAT TCGCGGCAAG CCAGGCCGCA
ACCGCGACCA CGGTCTCCGC CACGGCCGCC ACGTCGACCA CGTTGCCCGA AGTGACCGTC
ACCGCCGAGC GTCACGTGAC CGATCTGAAA AAGACCCCAG TATCGGTCGG CGTGCTCGGT
GCCGATCGGT TCACGACTGG CGGTGTCGCG CAGCCGGGCG ACCTGAACGC CGCCACTGCG
AGTCTGGTGG CCGGCGGTCC GTCGCAACGC ACGGCGGGCT CCGGCGGTAT CTATATCCGC
GGCATCGGCA CGGGTTCGCC GACTTACAGC AGCGCCGTCG CGCTGTATGT GGATGACGTG
TACATCCCGC GCTCGCTCGG CAACGGTTTG TATATGGCGT TCCCTGACGT CGAGCGCGTG
GAAGTGCTGC GTGGCCCGCA AGGCACGCTG TATGGGATGA ACAGCAGCGC CGGCGCGCGC
AAGGTGATTT CGCTGGATCC GACCGACAAC AGCGCATGGA TTCAGGGCAC GGCCGGCAGC
TATGGCGCAC TGGGCGTCAA AGCATACGTA TCGCACGAAA TCAAACCCGG ATTGCTGTAT
TTCAGCCTCG CGTATGGGCG TTACAAGGAC GACGGCTATA CCAACGATCC GGTAATCGGC
CGCAGTATCG ACTCGACCAA CACGGAGGTC CTGCGCGGCA AGGTGCGACT AACGCCCACG
GCCGACACCG AAGCCTTGTT CTCGTATGAC ATCGAGCGCG ACCGCTCGGA CACTTACAGC
TATATCGCAC CGAATTATCC GGGCTCTGGC ATCCGTACCA GTTATGAGAA TACCGATCCG
TCGATCGATC GTGACATTTC CGGCGTCTCG CTGCGATTGA CAAAAAAATT CGGTGACCAC
CTGTCACTGC GCTCGATTAC GGCGCACCGA TGGATCTCGG ACGGGCGCTA TCCGCTCACG
CAGGACGGCG TGCCGACCGA CTTGTACGGC TGGCTGCTAA ACATCGACCA GCATCAGACT
TCGCAGGAGT TCCAGTTCAA CGGCGACTAC GACCGCTTCA GCTTCACGAC CGGCGCGGTG
TATTTCTCCG AGGATGTCAC CGACTTTCGT CCGTCATGGA CCAGCGGTGT TTATAAAGGT
ATCGTCAGCC AGATCGAGAA CAAGAGTTAC GCAGCCTATG CACAAGGGCA CTACAAGATC
ACGCCGCAGT TTGGCGTGAC GGCGGGCATC CGCGTCAACC GCGACGAACA GAACTATCAG
AACACCGGCT TCGCCTCCAA CGCTGCGTTG CAGGTGCTCG GCACGACGTT CCAGACCGGC
CAGCTCACAC AGAACGTGAA CTCGGTGACG CCGAAGATCG GCATCGACTA TCAGTGGAAT
CCGAACATCT TCTCGTACGC AAGCATTACC AAGGGTGAAA AGTCAGGCGG CTACAACCCG
GTGGCGGCGA GCCTTGCGAT CTCGCAGATC GCGGTATCGC CGGAACGTGT GCTGACCTAC
GAACTGGGCA ACAAGCTCAC GTTCTGGGGC GGCCGCGCGC AGCTGAACAC CGCGCTGTTC
TATAACGACT TCGATGACTA CCAGGCCGCC ATCGGCAACG CGATCATCAA CGGCCAGCTG
ATCAACGGTT CGGTGACCGT CAACGCCGGC AAGGCGCGCA CCTACGGCGC CGAGTTCGAA
CTGACCGCAC GCCCGGTTTC GGACCTGAAT GTGAACACGT GGCTGACGGT ACAGCAGGCG
GAGTTCCAGC AGTTCGTCAA TCCGACCGGT GCGCCGACCG GCAACTATGT CGGCAACCAG
CTGCCGTACG CGTCGCACAT CATCGCTGGC GTGCATGCGA CGTATCGTCT GCCGCTGCAT
GTGCCGGGCA CCACCCGCAT CGGCGCGACG GTGCGTTTCC TGTCGCATTC GTATATCGAC
ATCGCCAACC AGCAGCCGCT CGGGGCGCAG ACCTATATCG ACGCGATGGC CGAATACACG
TCGCCGTCGT CGAACTGGAC CGCCACCTTC GAAGTGCGCA ACCTGCTCAA TCGCGCCTAT
GTGCTGGGCT ATAACGTGAC GCCGTCGATC GGATTGAACG CCTATAACTA CAGCCCGCCG
CGAACCTTCA TGGTGAGCCT GCGCCGCGAC TTCTGA
 
Protein sequence
MLRRKYNKRT TGSLRYDAAV LQCGRESGRF ALNAGAMKLL PFSLISALAT GFAHAQEPTA 
APSAASSTTA ATPFAASQAA TATTVSATAA TSTTLPEVTV TAERHVTDLK KTPVSVGVLG
ADRFTTGGVA QPGDLNAATA SLVAGGPSQR TAGSGGIYIR GIGTGSPTYS SAVALYVDDV
YIPRSLGNGL YMAFPDVERV EVLRGPQGTL YGMNSSAGAR KVISLDPTDN SAWIQGTAGS
YGALGVKAYV SHEIKPGLLY FSLAYGRYKD DGYTNDPVIG RSIDSTNTEV LRGKVRLTPT
ADTEALFSYD IERDRSDTYS YIAPNYPGSG IRTSYENTDP SIDRDISGVS LRLTKKFGDH
LSLRSITAHR WISDGRYPLT QDGVPTDLYG WLLNIDQHQT SQEFQFNGDY DRFSFTTGAV
YFSEDVTDFR PSWTSGVYKG IVSQIENKSY AAYAQGHYKI TPQFGVTAGI RVNRDEQNYQ
NTGFASNAAL QVLGTTFQTG QLTQNVNSVT PKIGIDYQWN PNIFSYASIT KGEKSGGYNP
VAASLAISQI AVSPERVLTY ELGNKLTFWG GRAQLNTALF YNDFDDYQAA IGNAIINGQL
INGSVTVNAG KARTYGAEFE LTARPVSDLN VNTWLTVQQA EFQQFVNPTG APTGNYVGNQ
LPYASHIIAG VHATYRLPLH VPGTTRIGAT VRFLSHSYID IANQQPLGAQ TYIDAMAEYT
SPSSNWTATF EVRNLLNRAY VLGYNVTPSI GLNAYNYSPP RTFMVSLRRD F