Gene Bxe_C0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0193 
Symbol 
ID4009741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp214001 
End bp214783 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637952847 
Productpeptide/opine/nickel ABC transporter ATPase 
Protein accessionYP_555467 
Protein GI91780260 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0231256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCGACGCATT GACGGTCCGC TTCAGGACCA GGACCGGTTA CTTCGACGCA 
GTACGCGAGG CGAGTTTTCA TGTCGGCGCA GGAGAGGTGT TCGGGCTGGT CGGCGAATCG
GGTTCCGGCA AATCGACGAT CCTGCGCGCG TTGACCGGAC TCGCCCCCCT CGCCGGCGGC
CATATGAAGA TCGGCTCGCA TGGGCCCGGA GAGAAGATCG ACCGCTCTTT TCGACGCGAC
GTGCAGATGG TTTTTCAGGA TCCGTACGGC TCACTGCATC CGCGTTTCAC AGTTGATCGA
GCCTTGCGCG AACCGCTGAC CATCAACGGC ATCGACCGGC AGGACGAACG CATCGTCGAC
GCGCTGCGCG AAGTCGGGCT GGGTCCGGCG TATCGCTTCC GCTATCCGCA TCAATTGTCG
GGTGGCCAGC GGCAGCGCGT CGCGATCGCA CGGGCGCTGA TTGTCGAACC GCGCGTGCTG
CTGCTCGATG AGCCGACATC CGCGCTCGAT GTGTCCGTGC AGGCCGAGAT TCTCAACCTG
CTGCGACGGC TTCATCGCGA GCGCAATCTG ACGATGATCC TCGTGAGCCA CAACCTGGCG
GTGGTCGGCT TTCTCTGCTC GCGCGTCGCG GTCATGCGCA ATGGCGAGAT CGTCGAGCAG
CGCGATATCG CGTCCATTCG CGCGCGACAG GTCGAGCATG AGTACACGCG CAACCTGCTG
CTTGCGACCA CGGGCTATCG GCGCAACGCC GTTCAGGCCA CTGGCACAGA CGCAGCGTTA
TAA
 
Protein sequence
MIDVDALTVR FRTRTGYFDA VREASFHVGA GEVFGLVGES GSGKSTILRA LTGLAPLAGG 
HMKIGSHGPG EKIDRSFRRD VQMVFQDPYG SLHPRFTVDR ALREPLTING IDRQDERIVD
ALREVGLGPA YRFRYPHQLS GGQRQRVAIA RALIVEPRVL LLDEPTSALD VSVQAEILNL
LRRLHRERNL TMILVSHNLA VVGFLCSRVA VMRNGEIVEQ RDIASIRARQ VEHEYTRNLL
LATTGYRRNA VQATGTDAAL