| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0183 |
|---|
| Symbol | |
|---|
| ID | 4009731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 202506 |
|---|
| End bp | 204092 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637952838 |
|---|
| Product | CPA1 family Na(+)/H(+) antiporter |
|---|
| Protein accession | YP_555458 |
|---|
| Protein GI | 91780251 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.496587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG TCGAGCTTTT CCATTATCTG CTGCTACTTG TTTGCGGCGC GGGCCTGCTG
ACCTGGCTCG CCGAGCGGCT GACGATTCCA CCCGCCGTGA TGTTGCTGGT GGGCGGCTCG
GCGGTCGCGT TATCCGGCCC GCACATGACC GTCGGCATGG ACCCCAATCT CATCCTGACG
GCGGTATTGC CTCCGCTGCT CATGTCGAGT TCCTTCTACA CCGCGTGGCG CGACTTCCGT
CGCGAGATCG CGACCATTTC ATCGCTGGCG TTGGGGGCGG TCGTATTCAC CACCGTGGCG
GTCGCGGTCG CGGTCCACGC CTTCGAGCCC GCATTGAGCT GGCCCGCCTG CTTCGCGCTC
GGCGCGATCG TCTCTCCGCC TGATGCGGTC GCGGCGAAAG CCATGCTCGA GCGTTATCCT
CTCCCGTCGA GACTGGTTAC CGTGCTCGAA GGAGAGAGCC TCGTCAACGA TGCGTCCGGG
CTTCTTCTTT ATCAAATGGC CATTGCGGCC GTGCTCGTCG GGCAGTTCAC GGTTAGCCGG
GCCGCTACCG TGCTGCTCAT GCTGATGGTG ATCGGCATCG CTACGGGTGC CGCCTGCGGA
CAAGCAATGA TCTGGTTGAT CAGACGGCTT CCCGATCCGA TGCTTCGCAT CGTGCTGACC
TTCCTGATGG CATGGGGCAG TTACAGTGTC GCGGAAGAAC TTGGTGGCTC CGGAGTCCTG
TCGGTCGTCA CGTGCGGCCT CGTCCTGGGC ATTCACCAGC ACCGCGTTTT CGATGCGCAC
ACGCGCATCA AGGCGACCGC CACATGGGAA GTCATCGTGT TTGTTCTGGA TGCACTCGTG
TTCATCCTGA TCGGACTCGC CCTGGAGGGC ATCGTGAGCC GGATGGGCAA CGTCTCGTCC
ATGCTGAAAA CCGGCGTCGG CGTTGCCCTT CCCGCCACGG TCGCGGCTAT TCTTGCCCGA
CTCCTGTGGG TGGCGGCGGC GATCTACCTG CCCTCCCTGC TTTCCTCACG ACTGGGAAAA
TCGCCTCATC CGTGGAGCCG CGGAGAAGCC GCCATTCTTG GCTGGGCCGG AATGAGAGGT
GTCGTGAGCC TTGCAGCGGC ACTCGCATTG CCCGACAACT TTCCAGGCCG GGATGTGATT
GTATTCAGTA CCTTTCTCGT CATCTTTGCA ACGCTGGTCA TTCAGGGGGG AAGTCTTGCC
TTCCTTATCC GTCTGACCGG TTTGCGCCCG GTGCGGAGCA CAACCATGTC CGAACTGGAG
GCACGCACAC ATACATTCGG AGCATCGCTG AAGGAGATCG AGAAAATCAG CCAATCGGCC
ACCGATGACG ACAAGCCCCT GGTTCAACGG CTAATCGATG AATACAAGGT TCGTGTCAGC
AACAACGAAA GGGCCTTCGA GGCGGGCAAA GAACACGTCG AATTGCGCGC GCGGCAATTG
CGCCTGGAAC TGGACCTGGT CGCCATATCG CGACAGGCGC TCCTTGGCTT GCACCATGAG
GGCAAAATCC AGGACTCCGT ACTGCACAGG CTGGAGGCTG AACTCGATCT CGAAGAGCTT
CGACTGCATC GGCTCCTGGA ACCATAA
|
|---|
| Protein sequence | MNNVELFHYL LLLVCGAGLL TWLAERLTIP PAVMLLVGGS AVALSGPHMT VGMDPNLILT
AVLPPLLMSS SFYTAWRDFR REIATISSLA LGAVVFTTVA VAVAVHAFEP ALSWPACFAL
GAIVSPPDAV AAKAMLERYP LPSRLVTVLE GESLVNDASG LLLYQMAIAA VLVGQFTVSR
AATVLLMLMV IGIATGAACG QAMIWLIRRL PDPMLRIVLT FLMAWGSYSV AEELGGSGVL
SVVTCGLVLG IHQHRVFDAH TRIKATATWE VIVFVLDALV FILIGLALEG IVSRMGNVSS
MLKTGVGVAL PATVAAILAR LLWVAAAIYL PSLLSSRLGK SPHPWSRGEA AILGWAGMRG
VVSLAAALAL PDNFPGRDVI VFSTFLVIFA TLVIQGGSLA FLIRLTGLRP VRSTTMSELE
ARTHTFGASL KEIEKISQSA TDDDKPLVQR LIDEYKVRVS NNERAFEAGK EHVELRARQL
RLELDLVAIS RQALLGLHHE GKIQDSVLHR LEAELDLEEL RLHRLLEP
|
|---|
| |