| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0176 |
|---|
| Symbol | |
|---|
| ID | 4009724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 194702 |
|---|
| End bp | 196162 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637952831 |
|---|
| Product | hydrogenase 4 subunit F |
|---|
| Protein accession | YP_555451 |
|---|
| Protein GI | 91780244 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.399009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CCTGGCTAGT GCCGCTGGTT TTCGCGATCC CGCTGTTCGC GGGCGCAACG
CTCGCGCTCG TGGGGCAACG CCCTGTCGCG CCGGAACTCA ACGTCGGCTT CAGTTTCCTG
ACCTTTGCCG CCGCCACGCT GCTCGCGGTG CAAACCGAGA CACACGGATC CGTATTCGCG
CCCGGCAAGC TCTTCTTCGT CGATCCGCTC AACGTATTTC TGGTCGCGTT AACGGCTTTC
GTCGGCTGGA CCACCTCGAT CTTCTCGAGG CCGTATATGC GCATCGAGCG GGACCGGGGC
AAGATGACCG GCCCCCGCAT GCGCCTTTAC CACAGCATGT ATCAGCTATT CATCTTCGCG
ATGCTGCTCG CGCTGCTCAC CAATAACATG GGCATCCTGT GGGTCGCCAT GGAAGCCGCC
ACGCTCGCGA CGGTACTGCT GGTTAGCGTC TATCGCACCG CGGCAAGTCT CGAAGCCGCC
TGGAAGTACT TCATTCTGTG CGGCGTCGGC ATCGCGCAGG CGCTGTTCGG CACCATCCTG
CTTTATCTCG CGGCGAGCCG ACAGCTCGGC GGTACCGATG CGCTGCTCTG GACCAGTCTG
GACGCGGTCA AAGGAAGCCT CGATCCCACC ATCATGTCGC TCGCGTTCGT GTTCCTGCTG
ATCGGCTATG GCACGAAGGT CGGCCTCGTG CCCATGCACA ACTGGTTGCC CGACGCCCAT
GCCGAAGGCC CCACGCCGAT CTCGGCCGTG CTGTCCGGCC TGCTGCTCAA TGTCGCGCTC
TATGCGGTGC TGCGCTGCAA GGTGCTGGCC GACGGCGCGC TCCGCAACGG CCTGCCGGGA
TACCTGCTGG TCGGCTTCGG ACTGGTCTCG GTGCTGGTCG CGACTTTTTC GCTGTTCCGC
CAGAAAGACG TCAAGCGGCT TTTTTCGTAT TCGTCGATCG AACACATGGG CCTGATGACG
TTCGCCTTCG GGCTTGGCGG ACCCATCGCG ACGTTTGCGG GGCTGCTCCA CATGACCGTG
CATTCGCTCG TGAAGTCGGC CATCTTCTTC ACCGTCGGGC ATGCGGCGCA GAAGGCCGGC
ACCCAGGCGA TCGACGATAT CCGCGGGTTG TTACGCGTGA GCCCGACTGT CGGGTGGGGC
ATGATGCTCG GAACGCTCGC GATCCTGGGC ATGCCGCCAT TCGGCGTCTT CGCGAGCGAG
TTCCTGATCC TGACGACCGC GATGAGCAAA CTCCCGTGGG CCACGCCGTT CCTGTTGCTC
GCGCTTGCCG TGGCGTTCGC GGCCATCTTC GTGCGGGTGC AGCGCATGGT GTTCGGCGAC
ACCACGGCCA GGGTTCTCGA ACACCCGCCG GCATTGCTGC CGGTGTTCGT CCATCTCGGC
ATCGGCCTCG TGCTGGGACT CTACATTCCG CCCTGGCTCG CGACGTGGTA TCGGCAGGCG
GCGGCCATGA TCGCGGGGTG A
|
|---|
| Protein sequence | MTEAWLVPLV FAIPLFAGAT LALVGQRPVA PELNVGFSFL TFAAATLLAV QTETHGSVFA
PGKLFFVDPL NVFLVALTAF VGWTTSIFSR PYMRIERDRG KMTGPRMRLY HSMYQLFIFA
MLLALLTNNM GILWVAMEAA TLATVLLVSV YRTAASLEAA WKYFILCGVG IAQALFGTIL
LYLAASRQLG GTDALLWTSL DAVKGSLDPT IMSLAFVFLL IGYGTKVGLV PMHNWLPDAH
AEGPTPISAV LSGLLLNVAL YAVLRCKVLA DGALRNGLPG YLLVGFGLVS VLVATFSLFR
QKDVKRLFSY SSIEHMGLMT FAFGLGGPIA TFAGLLHMTV HSLVKSAIFF TVGHAAQKAG
TQAIDDIRGL LRVSPTVGWG MMLGTLAILG MPPFGVFASE FLILTTAMSK LPWATPFLLL
ALAVAFAAIF VRVQRMVFGD TTARVLEHPP ALLPVFVHLG IGLVLGLYIP PWLATWYRQA
AAMIAG
|
|---|
| |