| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0173 |
|---|
| Symbol | |
|---|
| ID | 4009721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 190127 |
|---|
| End bp | 192526 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637952828 |
|---|
| Product | quinoprotein glucose dehydrogenase |
|---|
| Protein accession | YP_555448 |
|---|
| Protein GI | 91780241 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTT CCGCCTCAAT TCGCGTAGCG CATTTGCTTA GCGTTCTGTT TGCCTCATTG
TCGGGGGTGT ACCTGCTGGT CGGCGGGATC TGGCTAGCGG CGACCGGCGG ATCGCTGTAC
TACGTTTTCG CCGGTATCGT CATGCTCGTT ACGGCGGTTC TGATTTATCG GCGTTCCCCA
CTAGCACTCG GCCTCTACGC ATTACTGCTG TTGTGCACGA TCGTGTGGTC GCTGTGGGAG
GTCGGCACGG ATTTCTGGGC TCTTGCCCCG CGTCTGGACG TACTGGTCGT CTTCGGCATC
TGGCTGCTGT TGCCGTATGT CTATCGCGCG TTCGAGCCGT CCGCAAAAAC GCATGGTCTC
GCGCTCGGGG CCACGTTGAT CGTGAGCGTC GCAGTGCTGG TTTTTGCAGT CTTCAACGAC
CCACAGGAAA TCAACGGCAC GCTGGCGAGC GCGCCTGCCC AGGCGGCGGC GACGCCCGCC
GGCGAGCGCG TCGCCGAGGG CGACTGGCCC GCCTACGGCC GTACCCAGCA CGGTACGCGC
TACTCTCCGC TCAAGCAGAT CAACGCGGAT AACGTCAAGG ATCTGAAGGT CGCGTGGATA
TTCCGGACCG GCGACATGAA GCGCTCCACC GACCCAGGTG AAATCACGAA CGAAGTTACC
CCGATCAAGG TGGGCGACAT GCTGTATCTG TGCTCGCCGC ACCAGATACT GTTCGCGCTT
GACGCTGCCA CCGGCCAGGA AAAATGGCGC TTCGATCCCA AGCTGAAGAC CGATCCCAGT
TTTCAGCATG TCACGTGCCG TGGGGTGTCG TACCATGATT CGACCGCTTC GGGCAGTAAC
AACGACAGCC CGGACCAGGC CCCGGCTACG GCGCCTGCAA TCTGCGCGCG CCGCGTCTAC
CTGCCTGTCA ACAACGGGCA TCTGTACGCG CTCGACGCGC AGACCGGCCA GCTATGCCCG
GACTTCGCCA ATCACGGCGA CCTCGACCTG CAAGTGGGCC AGCCCGTGAC GACCGCGGGT
CAATATGAAC CCACTTCGCC GCCGGTCATC ACCGGGAAGG TGATCGTAAT CGCAGGCTCA
GTCGAGGATA ACTATTCGAC GCGGGAGCCC TCGGGAGTGA TCCGGGGTTT CGATGTCAAC
ACCGGCAAAC TGTTGTGGGC GTTCGATCCG GGCGCGAAGA ACCCGGAAGC GGTGCTCGGC
GCAGGCCAGC ATTATTCGGT CAACTCGCCG AACTCCTGGG CACCGGCTGT TTATGACGCA
AAGCTCGATC TTGTCTATCT GCCGATGGGC GTAAGCACGC CCGACATCTG GGGCGGCTAC
CGCACGCCGG AGCAGGAACG CTTTGCGAGC GGGCTGCTCG CGCTCAACGC GACGACCGGC
AAGCTCGCCT GGTTTTATCA GACGGTCCAC CACGACCTGT GGGACATGGA CCTGCCGGCG
CAGCCGACGC TCGCCGATAT CACGGACCGG TCGGGCAACC TCGTGCCGGC GGTCTACGCC
CCGGCAAAGA CGGGCAACAT TTTCGTTCTT GACCGCCGCA CAGGCACGCC GATCGTTCCT
GCTCCGGAGA AGCCGGTTCC GCAAGGCGCG GCGCAAGGCG ATCACGTGTC GCCCACCCAG
CCGTTTTCGG CGCTGACCTT CCGGCCGGAC AGGAAACTGA CCGGCGCGGA CATGTGGGGC
GCAACGATGT TTGACCAGCT CGTGTGCCGA GTGATGTTCC AGCGCCTGAA CTATGACGGC
ACGTTTACCC CTCCGTCGGT GAAGGGCACC CTGGTTTTTC CGGGTAACCT CGGGATGTTC
GAGTGGGGCG GCATAGCAGT GGATACCGAT CGCCAGATCG CGATTGCGAA CCCGATCGCA
CTGCCGTTCG TGTCCAGGTT GATGCCGCGT GGGCCGGGCA ACCCGATCGA ACCGGCCGCC
GGCGGCACGG GCGGCAGCGG TACCGAATCC GGTATCCAGC CGCAGTACGG CGTGCCCTTC
GGTGTGACGT TGAATGCCTT CATGTCGCCG CTCGGCCTGC CGTGCAAGCA GCCGGCGTGG
GGCTACATAT CCGCGGTCGA TCTGAAGACC AACCAGATTG TCTGGAAAAA GCGCATTGGC
ACCGTGCGTG ACAGTTCACC GCTGCCGCTG CCGTTCAAGA TGGGGATGCC GATGCTCGGC
GGCCCGATGA CAACGGCCGG CGACGTGTTC TTCATCGGGG CCACCGCCGA CAACTACATC
CGCGCGTTCG ACACCAACAC CGGCAAGCAG TTGTGGCAAG CACGTTTGCC CGCGGGTGGC
CAGGCGACGC CAATGACCTA CGAGGCGAAA GGGAAGCAGT ACGTGGTCAT CGCGGCCGGC
GGCCACGGCT CGTTCGGCAC CAGGTTGGGC GACTACGTGA TGGCTTATGC GCTGCCTTGA
|
|---|
| Protein sequence | MHSSASIRVA HLLSVLFASL SGVYLLVGGI WLAATGGSLY YVFAGIVMLV TAVLIYRRSP
LALGLYALLL LCTIVWSLWE VGTDFWALAP RLDVLVVFGI WLLLPYVYRA FEPSAKTHGL
ALGATLIVSV AVLVFAVFND PQEINGTLAS APAQAAATPA GERVAEGDWP AYGRTQHGTR
YSPLKQINAD NVKDLKVAWI FRTGDMKRST DPGEITNEVT PIKVGDMLYL CSPHQILFAL
DAATGQEKWR FDPKLKTDPS FQHVTCRGVS YHDSTASGSN NDSPDQAPAT APAICARRVY
LPVNNGHLYA LDAQTGQLCP DFANHGDLDL QVGQPVTTAG QYEPTSPPVI TGKVIVIAGS
VEDNYSTREP SGVIRGFDVN TGKLLWAFDP GAKNPEAVLG AGQHYSVNSP NSWAPAVYDA
KLDLVYLPMG VSTPDIWGGY RTPEQERFAS GLLALNATTG KLAWFYQTVH HDLWDMDLPA
QPTLADITDR SGNLVPAVYA PAKTGNIFVL DRRTGTPIVP APEKPVPQGA AQGDHVSPTQ
PFSALTFRPD RKLTGADMWG ATMFDQLVCR VMFQRLNYDG TFTPPSVKGT LVFPGNLGMF
EWGGIAVDTD RQIAIANPIA LPFVSRLMPR GPGNPIEPAA GGTGGSGTES GIQPQYGVPF
GVTLNAFMSP LGLPCKQPAW GYISAVDLKT NQIVWKKRIG TVRDSSPLPL PFKMGMPMLG
GPMTTAGDVF FIGATADNYI RAFDTNTGKQ LWQARLPAGG QATPMTYEAK GKQYVVIAAG
GHGSFGTRLG DYVMAYALP
|
|---|
| |