| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0142 |
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| Symbol | |
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| ID | 4009807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 155141 |
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| End bp | 156112 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637952797 |
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| Product | peptide/opine/nickel ABC transporter inner membrane protein |
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| Protein accession | YP_555417 |
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| Protein GI | 91780210 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.875081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.260436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG ACTCTCCCGA TCTGATCTCC AGCTCGCCTG AGCCGGGTGC TTCTTCGTGG
CGGCGGCAAC TGGCCGGCAC GCTGTTCGGT CAGCGCCGCG CCGGCGCGGC ACGCGCGCCC
GGCCCGCAGC GGACGGGGCG CGGCGTGTGG CGCGCGCTGC TGCGCAATCC GTCGGCGCTC
GCGGGGCTCG TGCTGTTCAC CGCGTTCATC GCGCTCGCGC TCGGTGCGGG GCATCTGTTT
CCTGGCGACC CACTCGATAT GGTCGCGGCT CCCTTCGAAT GGCCGGGCGC TGATCCGCAG
TACTGGCTCG GCACCGATTC GCTCGGGCGC GATGTGGCTG CAGGCATTGC GCATGGCACG
CGCGTGTCGC TGCTGATCGG CGCGGCGGCG GCGGCAATCG GGCTCGTGAT CGGCACGCTG
GTCGGCGCGG CGGGGGGCTT CTTCGGCGGA GTGGTCGACA ACGTGCTGGT GCGCGTCACC
GAACTCTTTC AAACCATTCC GTCGTTTCTG CTGGTAATCG TCATTGTTGC CATTGGCCGG
CCGGGCGTGA CGGTTATCGC GCTGGCCATC GGCATCGCGT CGTGGCCGAC CGTCGCGCGG
ATCGTGCGCG CCGAATTCCG TACCCTGCGC GAGGCGGACT TCGTGCTCGC GGCGCGTAGC
CAGGGGTTCA GCAACGCACG CATCATCTTC GGCGAAATTT TGCCGAATGC GTTGCCACCG
GTGATCGTCA CCGCGTCGGT CATGGTGGCG AGCGCCATCC TGATCGAGTC GTCGCTGTCG
TTTCTCGGCA TGGGCGACCC GAACGTCGTC AGCTGGGGCG GAATGATCGG CGCGGGCCGG
GATTCGTTGC GCACCGCGTG GTATCTGACC GCAATTCCCG GCACGGCGAT CGTCGTCGCG
GTGCTCTCGC TGAATCTGCT CGGCGACGGC CTGAACGACG CGCTCAATCC GCGTTTGCGG
GAACGCACCT GA
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| Protein sequence | MASDSPDLIS SSPEPGASSW RRQLAGTLFG QRRAGAARAP GPQRTGRGVW RALLRNPSAL
AGLVLFTAFI ALALGAGHLF PGDPLDMVAA PFEWPGADPQ YWLGTDSLGR DVAAGIAHGT
RVSLLIGAAA AAIGLVIGTL VGAAGGFFGG VVDNVLVRVT ELFQTIPSFL LVIVIVAIGR
PGVTVIALAI GIASWPTVAR IVRAEFRTLR EADFVLAARS QGFSNARIIF GEILPNALPP
VIVTASVMVA SAILIESSLS FLGMGDPNVV SWGGMIGAGR DSLRTAWYLT AIPGTAIVVA
VLSLNLLGDG LNDALNPRLR ERT
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