| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0133 |
|---|
| Symbol | |
|---|
| ID | 4009798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 145961 |
|---|
| End bp | 146812 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637952788 |
|---|
| Product | nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein |
|---|
| Protein accession | YP_555408 |
|---|
| Protein GI | 91780201 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.744619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CAGCCATCCC CGTCGCCACG GCTGCTGGCG GCGACGCGCG CAGTCAGCAC
AAAGCGCGGC GCACAGGCGA ACGGCTGCGC AGCGTCGCCT GGCTTCTCGC ACCGTGGCTG
CTGCCGGCGG CACTGCTGGC GCTCTGGACG ATCGGTTGTG AGCGCGGCTG GATCGCCCCG
CAAATTCTGC CGCCACCCGC GCGCGTCTAT GAAACCTTCA TGGAACTCGC GCACAGCGGC
GACCTTGTGC GTCACACGCT GATCAGCTTG CAGCGGGTCG TGGTCGGCTT CGGCATCGGC
ACCATGGGGG GCTTTGCGAT CGGCGCGGCG CTCGGTCTGT CGCGCACGCT GGAAGCCTAT
GTTTTGCCCG GCTTCAATGC GCTCGTCCAG ATTCCGGTAC TCGGTTGGCT GCCGTTTCTG
CTGCTGCTCG TCGGAGTCGG CGAGCCGCTC AAGTACATCC TGATCGCGCA TGCGGCGCTC
GTACCGGCCA CGCTCAGCAC CTTGCAAGGT TTCCGCCAGT CGCCTCACAG CCTGGAGGAA
GTCGCACGCG GATACGGCTA CAGCGAATGG CAGCGGATTG TCTACGTGGT GTTGCCCGCC
GCCGTTCCCA CGCTCGCGAC CGGCGTGCGG CTGGCCTTCA CGAAGGCATG GCTGGCGCTC
GTCGTCGTCG AACTGGTCGC GTCGTCAGAG GGCCTTGGCT ATCTGATCGT TTATGGACGG
CAACTGTTTC AACTCGATCT GGTGATGGCG TCGGTCGTCG TGGTCGGCGC GATCGGCCTC
GTCGTGAACC GCCTGCTCGA TTCACTCGAA GCGCGTCTGC GGCGCGGACA GCCGTCCGCG
TTCCGCGAGT GA
|
|---|
| Protein sequence | MSETAIPVAT AAGGDARSQH KARRTGERLR SVAWLLAPWL LPAALLALWT IGCERGWIAP
QILPPPARVY ETFMELAHSG DLVRHTLISL QRVVVGFGIG TMGGFAIGAA LGLSRTLEAY
VLPGFNALVQ IPVLGWLPFL LLLVGVGEPL KYILIAHAAL VPATLSTLQG FRQSPHSLEE
VARGYGYSEW QRIVYVVLPA AVPTLATGVR LAFTKAWLAL VVVELVASSE GLGYLIVYGR
QLFQLDLVMA SVVVVGAIGL VVNRLLDSLE ARLRRGQPSA FRE
|
|---|
| |