Gene Bxe_C0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0128 
Symbol 
ID4009793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp142190 
End bp142948 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637952783 
Productpolar amino acid ABC transporter inner membrane protein 
Protein accessionYP_555403 
Protein GI91780196 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA TGAACGCGTG GCTCGAACCT CGCTATGTCG CGTGGATATG GCGCGGCTTT 
GCGATGACGC TGGCGCTGTC GGCCAGCGTC GCCGTTTGTG CGACGCTGCT GGGCTTTGCG
CTGGCGCTCG CCCGCAGCGC TCCTTCCGCC GCGTTGCGCC GTGCGGCGGC CGGCTACGTT
CTGATATTCC GGAACTCACC GTTGCTCGTT CAATTGCTGT TCTGGTATTT CGGTGCGGCG
GTCCTGTTGC CGGATGGCTT GATGAACTGG CTCAATACTC CGCATGTCGT CGTGCTTGGA
CCTGTCACGC TGAGTTGGCC GACGTTCGAA TTCGTCGCGG GCTGGCTCGG TCTCACGTGC
TATTCGACGA CCTTCATCGG CGAGGAATTC CGCGCGGGAA TGCGCGGCGT GCGCGATGGC
CAGTATCAGG CGGCCGCCGC GCTTGGCTTG ACGCGGTTCG CAACGTTTCG CCACGTGATT
TTGCCGCAGG CGGTGCGGAT CGCGACGCCG CCGCTCGCCG GGCAATATAT GAATGTCATC
AAGAATTCGT CGCTGACGAT GGCCATCGGC TTCGCCGAAT TGTCGTACTC GTCGCGCCAG
GTCGAGACGG AGACGCTCAA GACGTTCCAG TCGTTCGGAA TGGCGACCTT GCTCTACATT
GCGGCGATCG CCACGATTGA AGTCGCGTTG CTGATCTGGC AGCGCCGCGG CGCGTATGGA
TCGGGTGGCG TGCGGTTTCC GCGCGGAGGC CGCTCATGA
 
Protein sequence
MMTMNAWLEP RYVAWIWRGF AMTLALSASV AVCATLLGFA LALARSAPSA ALRRAAAGYV 
LIFRNSPLLV QLLFWYFGAA VLLPDGLMNW LNTPHVVVLG PVTLSWPTFE FVAGWLGLTC
YSTTFIGEEF RAGMRGVRDG QYQAAAALGL TRFATFRHVI LPQAVRIATP PLAGQYMNVI
KNSSLTMAIG FAELSYSSRQ VETETLKTFQ SFGMATLLYI AAIATIEVAL LIWQRRGAYG
SGGVRFPRGG RS