| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0102 |
|---|
| Symbol | |
|---|
| ID | 4009767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 114739 |
|---|
| End bp | 115842 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637952758 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_555378 |
|---|
| Protein GI | 91780171 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.988493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACG CACCGTTGAC CGCCGTGACG CCGCAACTGG CCACGTGGCT CGATGCCAAC
GCCGAAGCGA TCGACGCCGG CCAGGAACTC GCGCCGCAGA TCCTGCCGCA GCTCGGCCGC
GCGGAGCTGT TCCGGATCGG TGTGCCGGGC CAGCTGGGCG GCCTCGGCGG CACGACCGTC
GAGGCGATCG AAGCCGTGGC CGGTGTCGCG GGGCATTCTC TGGCGGCGGC ATTCGTATTC
TGGGGCCAGC GCACGTTCAT CGAATACCTG CTGCAAAGCC CCAACGAAGC GCTGCGCACG
CGCTCACTGC CGATGCTTTT GCGTGGCGAA CTGGCGGGCG CGACGGGTCT GTCGAACGCG
ATGAAGTATC TGTCGAATAT CGAACCGCTG CAAATGAACG CGGCGCCGCT GTCCGGCGCC
GGCGTGACAG CAGGCTGGAC GCTGAACGGC AGCCTGCCGT GGATCACGAA TCTGCGCCGG
GAAGGGTTTC TCGCCGCGGC GGCGTTCGAT CACAGCGACG GCGCGCCGCC TTCGATTTTC
GCCATTCCGC ACGATGCGCC GGGCGTGATC CGCAGCGACG ATCTCGATCT GATCGCGCTG
CGTTCGAGCA ATACGGCCGC GCTGAAACTC GACGGCGCGG TGCTCGACGC AAGCTGGCAG
ATCACGGCTG ATGCGCGCGC TTTTCTGGTT CAGGCGCGAC CGGCTTTTCT CGGCCTGCAA
TGCGGCATGT CGATCGGCCT CGCGCGGCGC GCGCTGGCGG CGGTCGCGGC GAGCAGCGCC
GCAGTGCGCG CCGCCGTCGA CGGCGAAGCC AGCCGGCTCG CATACGATCT CGACGCCCTG
TCGCAGCGGC TCTTCGACGG TATCCGGCAC GGCACCTTCC TGGCGGCGCC AGCGACGCTG
TTCGAAGTGC GGATCGGGCT CGCCGCGCTG GTCGATGCGG CGGTCCGGCT CGAAGTCCAG
GCCGCCGGCG GGCGCGGCTA TCTGCGCGGT CCCGGCGGCG CGGCCCGACG CACGCGCGAA
GCCGCGTTCG TGCCGATCGT CACGCCAAGC ATCGTGCAGT TGAAGAACCA GCTGGCGCAG
CATCGGCAAG CGCAAGCAGC ATGA
|
|---|
| Protein sequence | MNHAPLTAVT PQLATWLDAN AEAIDAGQEL APQILPQLGR AELFRIGVPG QLGGLGGTTV
EAIEAVAGVA GHSLAAAFVF WGQRTFIEYL LQSPNEALRT RSLPMLLRGE LAGATGLSNA
MKYLSNIEPL QMNAAPLSGA GVTAGWTLNG SLPWITNLRR EGFLAAAAFD HSDGAPPSIF
AIPHDAPGVI RSDDLDLIAL RSSNTAALKL DGAVLDASWQ ITADARAFLV QARPAFLGLQ
CGMSIGLARR ALAAVAASSA AVRAAVDGEA SRLAYDLDAL SQRLFDGIRH GTFLAAPATL
FEVRIGLAAL VDAAVRLEVQ AAGGRGYLRG PGGAARRTRE AAFVPIVTPS IVQLKNQLAQ
HRQAQAA
|
|---|
| |