Gene Bxe_C0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0100 
Symbol 
ID4009765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp112742 
End bp113932 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID637952756 
Productnitrate/nitrite/cyanate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_555376 
Protein GI91780169 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.227114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.537489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCAGC TTCCGATGTC CCGCCGCGAG TGGCTCAAAC TCGCCTCGAT GTTCACCGTA 
GCCGGTGCCG CGCCGCTACT CGCCGCATTG AACGCGCGCG CCGCCGAGAA CCCTGACGCG
CCCGTACGTA TCGGCTATCT GCCGATCACG GACGCGGCAC CTTTGCTGGT TGCACACAAC
AACGGCTATT TCGACGCGTC GGGGCTCGCC GTCGAAAAAC CGACCCTGCT GCGCAGTTGG
GCGCAGCTCG TCGAAGCGTT CCTGTCGGGT CAGGTCAATG TGGTGCATCT GCTCGCGCCC
ATGACGATCT GGGCACGCTA CGGCAGCCAG GCACCCGCGA AAGTAGTCGC GTGGAATCAT
GTGAACGGCT CCGCGCTCAC GGTTGCGCCG GACATCGGCA AGCTCGGCGA GCTCGGCGGC
AAAACCGTGG CCGTGCCGTT CTGGTATTCG ATTCACAACG TCGTGGTGCA GCACATGTTA
CGTGCGCAGG GGCTCGTGCC GGTGCTGGAG AAGGACGGCG AGCTCAAGGC GAACGAAGTG
CGGCTGATCG TGATGTCGCC GTCGGACATG CCGCCCGCGC TCGCTTCGAG GCAGATCGCC
GGGTTCATCG TCGCCGAACC GTTCAACGCG GCGGCCGAGG AGTTGAAAGT CGGCAAGGTG
CTGCGCTTTA CCGGCGACGT CTGGAAGAAT CACGCCTGCT GCGTCGTGTT CATGCATGAG
CGCGATCTGA CCGAACGGGC CGCGTGGTCG CAGAAGGTCG TCGACGCGGT GGTCAAGGCC
CAGGTCTGGA CCCGCGCGCA TCCGCAGGAA GCCGCTCAGT TGTTGTCGAA GAGCGGCCGG
AACCACTACA CGCCCCATTC CGCCAACGTA TTGACGAACG TGCTAGCGCC GCCGCCCGGC
GACGAGGGCC GCTATCTGGC CGATCGCGCG ATCACGCATG CGGACTGGCA TGCGAAGCGG
ATCGATTTTC AGCCGTATCC GTACCCAGCC TATACGGAAG AACTCGTCAG GCGGCTGAAG
GCGACGCAGG TCGAAGGGAA TGCACAGTTC CTGCATCAAC TCGATCCCGC CTTCGTGGCG
CGCGATCTGG TCGACGACCG TTTCGTGAAG AAGAGCATCG AGTCCGCTGG CGGCATGAAG
GCGTTCGGCC TCGCCGAGAG TTTCACGCGA ACGGAGACGA TTCTTGTCTA G
 
Protein sequence
MCQLPMSRRE WLKLASMFTV AGAAPLLAAL NARAAENPDA PVRIGYLPIT DAAPLLVAHN 
NGYFDASGLA VEKPTLLRSW AQLVEAFLSG QVNVVHLLAP MTIWARYGSQ APAKVVAWNH
VNGSALTVAP DIGKLGELGG KTVAVPFWYS IHNVVVQHML RAQGLVPVLE KDGELKANEV
RLIVMSPSDM PPALASRQIA GFIVAEPFNA AAEELKVGKV LRFTGDVWKN HACCVVFMHE
RDLTERAAWS QKVVDAVVKA QVWTRAHPQE AAQLLSKSGR NHYTPHSANV LTNVLAPPPG
DEGRYLADRA ITHADWHAKR IDFQPYPYPA YTEELVRRLK ATQVEGNAQF LHQLDPAFVA
RDLVDDRFVK KSIESAGGMK AFGLAESFTR TETILV