| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0069 |
|---|
| Symbol | |
|---|
| ID | 4009616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 77191 |
|---|
| End bp | 78528 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637952726 |
|---|
| Product | major facilitator superfamily metabolite/H(+) symporter |
|---|
| Protein accession | YP_555346 |
|---|
| Protein GI | 91780139 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.085509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00969207 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACTACG CACAGTCATG GGACGCGGAG GCGATGCAGC GCCAGTCACC GAGCCTGTTG
CGGCGCGCGA TTGCCGCATC GGCATTGGGC AATGCCACGG AGTGGTTCGA CTATGGAATC
TATGCATACG GTCTGACCTA TATATCGGCT GCGCTTTTTC CGGGCAGCAC GGCGCAGGCC
ACGCTTTTCG CCTTGGCTAC CTTTGCCATT TCGTTTCTGG TTCGTCCGCT TGGCGGATTG
TTCTGGGGGC CGCTCGGTGA CCGCCTGGGT CGCAAGCACG TGCTGGCGCT GACGATCATC
CTGATGTCGG TGGCAACGCT GCTGGTCGGA CTCGTGCCGA GCTACGCGCG CATCGGGTGG
TGGGCGCCTG CGCTGTTGAT CGTCTTGCGG ATGATTCAGG GTTTTTCGAC CGGCGGAGAG
TATGGCGGCG CGGCGACCTT CATGGCCGAA TACGCACCTG ACAAGAAGCG CGGCTTCTGT
GGCAGCTTTC TTGAATTCGC GACCCTCGCG GGGTTTTCGC TCGGTGCGTT TCTGATGCTC
GGCTGCTCGG TGGTGCTGGG CAACGCCAGC ATGCACGCAT GGGGATGGCG TCTGCCGTTT
CTGATTGCCG CGCCGCTCGG CCTGATCGGC TTCTATTTGC GTTCGAAACT GGAGGACACG
CCTGTCTTTA TCGAACTGGA ACAATCGAGC CATAAGGAAC AGCAGGGCCG CGTGTCGCTA
AAAGCCTTGC TGACCGGATA CTGGAAACCG CTGCTGCTGC TGGGCGGGCT GGTGGTGGCG
TTAAACGTCG TCAATTACGT GCTGCTGGCT TACATGCCTA CTTTCATGCA GAAGCAACTG
GGCATGAGCG ACAACATGTC GTTGCTGGTC CCGCTGATCG GCATGTTGAC GATGATGGTG
TTTCTGCCTT TCGCCGGGAC GTTCTCGGAC CGGATCGGCC GCAAGAATGT CTGGTGGTTC
TCACTGATTG GCCTCTTTGT TGCGGCCATT CCGATGTTCG TTCTGATGAA GCATGGCATG
GCCGGCGCGC TGATCGGCTT TTCCGTGCTG GGCTTGCTGT ACGTGCCGCA GCTTGCAAGC
ATCTCGGCGA TGTTCCCGGC GATGTTTCCC ACCCAGGTGC GTTATGCCGG GATGGCGATT
GCCTACAACG TTTCCACGTC GATCTTCGGC GGTACGGCCC CGATGGTGAA TGAGTGGTTC
ATTGCCCGCA CGGGTAATGC ACTGGTGCCG GCATACTACA TGATGGGTGC GTGTGTGATC
GGCGCGCTGG CGCTGATCTT CGTCACCGAG ACATCGGGCT GCTCGTTGCG CGGGCGGGAG
ATACCTGGGA AGAAGTAG
|
|---|
| Protein sequence | MDYAQSWDAE AMQRQSPSLL RRAIAASALG NATEWFDYGI YAYGLTYISA ALFPGSTAQA
TLFALATFAI SFLVRPLGGL FWGPLGDRLG RKHVLALTII LMSVATLLVG LVPSYARIGW
WAPALLIVLR MIQGFSTGGE YGGAATFMAE YAPDKKRGFC GSFLEFATLA GFSLGAFLML
GCSVVLGNAS MHAWGWRLPF LIAAPLGLIG FYLRSKLEDT PVFIELEQSS HKEQQGRVSL
KALLTGYWKP LLLLGGLVVA LNVVNYVLLA YMPTFMQKQL GMSDNMSLLV PLIGMLTMMV
FLPFAGTFSD RIGRKNVWWF SLIGLFVAAI PMFVLMKHGM AGALIGFSVL GLLYVPQLAS
ISAMFPAMFP TQVRYAGMAI AYNVSTSIFG GTAPMVNEWF IARTGNALVP AYYMMGACVI
GALALIFVTE TSGCSLRGRE IPGKK
|
|---|
| |