Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0066 |
Symbol | |
ID | 4009613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 75004 |
End bp | 75663 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637952723 |
Product | polar amino acid ABC transporter inner membrane protein |
Protein accession | YP_555343 |
Protein GI | 91780136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.543633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00283643 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGACT GGTCCGGTTA TCTGCTGCTG ATTCTGAAGG GCGCGCAGAC AACCGTCGAA CTCACGGTGA TGGGAGCGGC GCTTGCGCTC GTGATGGCGT TCGTGGCCGG GCTCGGACGG TTGTCCCGGT TCACCGCCGT GCGCGCGCTA GCCACGTCGT ATATCGAGTT CTTTCGCGGC ACCTCGGTAT TCGTCCAGTT GTTCTGGGCG TATTTCGTCT TGCCGATGGT CGGGCTTACG CTCACGCCGT TGCAGGCCGG TGTGCTCGCA CTCGGCCTGA ACGTCGGCGC GTACGGCGCG GAGGTGGTGC GCGGCGCGGT CGTCGCGGTC GGCCAGGAGC AAAGGAGCGC ATGCGTCGCG TTGAATCTGT CCAGTTATCA GCGCATGCGC CACGTGATCC TGCCGCAAGC GTTGCCGCTG ATGCTGCCGA CCTTCGGCAA CAACGCGATC GAGCTGCTCA AGGGAACCGC CGTCGTGTCG CTGATCTCGC TGGGGGACAT GACGTTCCAG GCGCAGGTCG TACGTTCGCA AACCGGCAAT ACGTTGATAC CGTTCGCGAC GATTCTCGCG CTGTACTTCG CGATGGCTTG CCTGATCGCG CTCGGCGTGC GCAAGCTCGA GCGCCGGATG AGCTTCGGTC TCGACAGGAT GAGGAGATAA
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Protein sequence | MNDWSGYLLL ILKGAQTTVE LTVMGAALAL VMAFVAGLGR LSRFTAVRAL ATSYIEFFRG TSVFVQLFWA YFVLPMVGLT LTPLQAGVLA LGLNVGAYGA EVVRGAVVAV GQEQRSACVA LNLSSYQRMR HVILPQALPL MLPTFGNNAI ELLKGTAVVS LISLGDMTFQ AQVVRSQTGN TLIPFATILA LYFAMACLIA LGVRKLERRM SFGLDRMRR
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