Gene Bxe_C0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0066 
Symbol 
ID4009613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp75004 
End bp75663 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID637952723 
Productpolar amino acid ABC transporter inner membrane protein 
Protein accessionYP_555343 
Protein GI91780136 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.543633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00283643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGACT GGTCCGGTTA TCTGCTGCTG ATTCTGAAGG GCGCGCAGAC AACCGTCGAA 
CTCACGGTGA TGGGAGCGGC GCTTGCGCTC GTGATGGCGT TCGTGGCCGG GCTCGGACGG
TTGTCCCGGT TCACCGCCGT GCGCGCGCTA GCCACGTCGT ATATCGAGTT CTTTCGCGGC
ACCTCGGTAT TCGTCCAGTT GTTCTGGGCG TATTTCGTCT TGCCGATGGT CGGGCTTACG
CTCACGCCGT TGCAGGCCGG TGTGCTCGCA CTCGGCCTGA ACGTCGGCGC GTACGGCGCG
GAGGTGGTGC GCGGCGCGGT CGTCGCGGTC GGCCAGGAGC AAAGGAGCGC ATGCGTCGCG
TTGAATCTGT CCAGTTATCA GCGCATGCGC CACGTGATCC TGCCGCAAGC GTTGCCGCTG
ATGCTGCCGA CCTTCGGCAA CAACGCGATC GAGCTGCTCA AGGGAACCGC CGTCGTGTCG
CTGATCTCGC TGGGGGACAT GACGTTCCAG GCGCAGGTCG TACGTTCGCA AACCGGCAAT
ACGTTGATAC CGTTCGCGAC GATTCTCGCG CTGTACTTCG CGATGGCTTG CCTGATCGCG
CTCGGCGTGC GCAAGCTCGA GCGCCGGATG AGCTTCGGTC TCGACAGGAT GAGGAGATAA
 
Protein sequence
MNDWSGYLLL ILKGAQTTVE LTVMGAALAL VMAFVAGLGR LSRFTAVRAL ATSYIEFFRG 
TSVFVQLFWA YFVLPMVGLT LTPLQAGVLA LGLNVGAYGA EVVRGAVVAV GQEQRSACVA
LNLSSYQRMR HVILPQALPL MLPTFGNNAI ELLKGTAVVS LISLGDMTFQ AQVVRSQTGN
TLIPFATILA LYFAMACLIA LGVRKLERRM SFGLDRMRR