Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0015 |
Symbol | |
ID | 4009524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 17726 |
End bp | 20269 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637952672 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_555292 |
Protein GI | 91780085 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAAG CTCAGATAGC CGGGACTCTC GTGCAGGTTC TCGCACAAAT ACCGGACGCG GTCGTGCTCG TGGACGAGGA CGGCGCAATC GGCTTCTTCA ATCCGGCGGC CGAAGCGCTC TGGGGTTTGA CTGCCGCGGC GGTTCTTGGC GCGGATGCCG GCATGCTCCT GCCGCGCGGA ATCCAGCCAG CCGGCCACGG AGTGCAAACC GGCAACGTCG ACGGCCCCGG CTTGGCTCTG CAGATCGAGC GCAACGATGG CGTGATGCGC CGGGGCCAGA TGTCGATACA CGGGTTCGAA GTGGCCGGCC GCAGATTTCG CGCGGCTTTC ATCCGCGACA TAACGGACCA GCACAGACAG TGCGAAGAAT GGCAGCAGTT ATTGCGCGTG GTGAATGGAA GCGACAACGC GATCATCGTG GCCAGTCTTG ATGGGAGCAT TTCGTTCATC AACAGCGGCG TCACCAGAAT GCTGGGATAC GCGGCTGCCG AAGTCCAGGG CCTGCGCCTT GTCGAACCGT TCGCCGGCGT GCACACGAAC ATGGCGGCGG TCGAACGCAT CCAGTCCGCC GCGCGGGAGC CGTCGACGCC AGATCACCCG TTCCGCCAGG ATCTGCTCGT GTACACGAAG GGCGGCAGAC CGCTCTGGGT CAATGTGGGG ATCACCGTCA TTACGGACAA CGCGGGCGCA CCGGTCAACC TTCTCGCGGT GCTGACCGAT ATCACGCTGA CCAGGATGCG CGAGGAGCTT CAGCAAAAGG TGCTAGATGC GATGGCGCGC GAGTTGCCCG CGACCGAGGT TGCCGGAATC TTGTGCCGGG AGGTGGAGCG CATCGCGCCT GAAGTCGTGG CGACGTTTCT GCGCGTGGAC GACGGGCGGC TCTTCACGCT GGCCGCGCCA CGCTTGCCCG TCACCGTAAC CCGGGCGATG GATGGCGAGT CGATCGGGCC GTGCGCCGGC TCATGCGGTA CCGCCGCCTG GCGGGGCACG CCGGTCGTGG TGACGGACAT CGCCAGCGAT CCGTTGTGGA CCGGTTACCG CGATCTGGTG CTGCCGCTCG GACTCGCCGC GTGCTGGTCG TATCCGGTCA AGGGCGCCGA TGGCTCGGTG CTTGGCACGT TCGCGTTCTA TTACCGCGAA AATCACGGCC CGGTTGCATT CCATCAGAGT CTCGTGGACA TGGGACTGAG TCTTTGCGCG CTTTTGCTCG AACGCGAGAA AGCACGCATG CGCATTCATC AGCTTGCGTT TCACGACACG CTGACCGGCC TGCCGAACCG CAATATGTTC GAGACCCAGG CGCAGCAGCT TCTGAACGAC GCGCGCCGCA CGGAACGCGA ACTCGCGCTG GTGTTCATCG ATCTCGACCA TTTCAAGCGG GTCAATGACA CCAGGGGGCA CGCGACAGGC GACGAGGTGC TCTGCGAGAC CGGCCGCCGC TTCAAGTCAG TGCTTCGGGA CGGCGATCTG CTAGGCCGTC TCGCCGGCGA TGAATTCGTC GCGATTCTGC CGCATTGCGG CGTGCATCAG GCGACGGGCA TCGTCGAGCG TCTGCTTGCC GCGACTGCGC CGCCGGTGGT CGTGGCGGGT GCGCCAATCC ACGCGAGCGC CAGCATCGGC ATCGCGATGT ATCCCGCGGA CGGCGAGCAC GTTCCGACAC TGCTGCGCCA GGCCGACATT GCGATGTACC ACGCCAAGGC CAGGGGCCGC GGCCACTTCT GTTTCTTTCG CGAGGAGATG AGCCGCAACA TCCAGGAGCA GGCAATGCTG GAGGCCGACC TGCGCGTTGC GTTGAAACAC GACCTGCTCG ATCTTTGGTA TCAGCCGCAG TTCGACGCCG CGAACGGCCA TGTGCTTAGC GGCGTGGAGG CGCTGCTGCG CTGGAATCAC GCGACGCTGG GCAGCGTGCC GCCGGTGCGC TTCGTCGTGC TGGCGGAAGA ATGCGGATTG ATCGGAGAGC TGGGCAAATG GGTGACGCAG CGGGCGTGCC GTCAACTCGC GGACTGGCGT GCCCGAGGCG TGGAGATTCC GCGGGTGTCG ATCAACCTGT CCGCCAGCGA CTTTCGCGAC AGCACGCTGG CCGAGCGGGT TGCGCGGACC TTGCTCGCGC ATGGTTTGCA ACCGCACGAC CTGACGCTCG AGATGACGGA GAGCGTCATG CTGGGCGACG AGCCGGGAGT TCTGTCGATG ATCGACGAGC TGCACCGTCT GGGCATTCAA TTGTCGCTGG ACGATTTCGG CACGGGCTAT TCGAGCCTCG GTTATCTTCA CCGCTTGCCG CTCGACGAAC TGAAACTCGA CAGGAGCTTC GTGCGCGATC TCGATCACAG CGACTCGGCG CGCGCGCTGA CCTCGACGGT ACTGCGCATC GGCGAGAGCC TGAACATCAA GGTCGTCGCC GAGGGCGTGG AGACCGATAC ACAGCGACAG TTTCTGGTCG AGCATGGCTG CCCGGTGTTG CAAGGCTATC TGCTTGCGCG CCCGATGGCA CCGCATCTGC TCGAAGAATG GCTGCGCGCG GCTCATGCGG GCTCGCGCAT TTGA
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Protein sequence | MAQAQIAGTL VQVLAQIPDA VVLVDEDGAI GFFNPAAEAL WGLTAAAVLG ADAGMLLPRG IQPAGHGVQT GNVDGPGLAL QIERNDGVMR RGQMSIHGFE VAGRRFRAAF IRDITDQHRQ CEEWQQLLRV VNGSDNAIIV ASLDGSISFI NSGVTRMLGY AAAEVQGLRL VEPFAGVHTN MAAVERIQSA AREPSTPDHP FRQDLLVYTK GGRPLWVNVG ITVITDNAGA PVNLLAVLTD ITLTRMREEL QQKVLDAMAR ELPATEVAGI LCREVERIAP EVVATFLRVD DGRLFTLAAP RLPVTVTRAM DGESIGPCAG SCGTAAWRGT PVVVTDIASD PLWTGYRDLV LPLGLAACWS YPVKGADGSV LGTFAFYYRE NHGPVAFHQS LVDMGLSLCA LLLEREKARM RIHQLAFHDT LTGLPNRNMF ETQAQQLLND ARRTERELAL VFIDLDHFKR VNDTRGHATG DEVLCETGRR FKSVLRDGDL LGRLAGDEFV AILPHCGVHQ ATGIVERLLA ATAPPVVVAG APIHASASIG IAMYPADGEH VPTLLRQADI AMYHAKARGR GHFCFFREEM SRNIQEQAML EADLRVALKH DLLDLWYQPQ FDAANGHVLS GVEALLRWNH ATLGSVPPVR FVVLAEECGL IGELGKWVTQ RACRQLADWR ARGVEIPRVS INLSASDFRD STLAERVART LLAHGLQPHD LTLEMTESVM LGDEPGVLSM IDELHRLGIQ LSLDDFGTGY SSLGYLHRLP LDELKLDRSF VRDLDHSDSA RALTSTVLRI GESLNIKVVA EGVETDTQRQ FLVEHGCPVL QGYLLARPMA PHLLEEWLRA AHAGSRI
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