Gene Bxe_C0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0006 
Symbol 
ID4009813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp7222 
End bp8178 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID637952664 
Producthypothetical protein 
Protein accessionYP_555284 
Protein GI91780077 
COG category[S] Function unknown 
COG ID[COG3817] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.686055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCT CGCTCAACGT GCTTTTCTGG CTGCTCGGTA TTCTGCTGGT TGTGATCGGC 
GGCCTGATTG TCGGCGATCG CGCGCATCCG AAGCGTTTCT TCGCCGGCGG CTTCTGGATT
GTCTACGGGC TGATCTTTCT CGTGGGTGAC AGGCTGCCGG CCGATGTGGT TGGCGTGCTC
GTCGTCGCAA TGGCGCTGGT GGCCGGTTTT GGCGGCGTCG TCGGCGCCAG ACCCAGGCTG
CGCTCCGACG ACGAACGTCG TGCGAGCGCG CAGCGTCTCG GTAACCAGCT GTTCCTGCCG
GCCCTGACCA TTCCGTTCGT CACGGTGATC GGCACGCTCC TCACGCCGCA TCTGGTATTT
GGCGGCATTG CGTTGATCGA TCCGAAGAAC GCGACGCTGG TCTCCTTTGG CGTGGGCTGT
GTTGTTGCAT TGGTACTGGC TTGCCGGCTG ACGCGCGACA CGCTCGGCCA GGCGGTCAAG
GAAGCGCGGC GCCTGGTCGA TTCGTTGTCT TGGGCGGTCG TGCTGCCGCA AATGCTCGGC
ATGCTCGGGC TGGTGTTCGC CGATGCAGGT GTCGGCAAGG CGGTCGCGCA TCTGACCACC
TCCTATATCG ATCTCGATTA TCGCTTCGTC GCGGTGGTGG TTTACTGCGC CGGCATGGCA
CTTTTCACGA TCATCATGGG TAACGGCTTT GCGGCCTTTC CGGTCATGAC GGGCGGCGTC
GGCGTGCCGG TGCTGATCGG CGTGTTTCAT GGCAATCCGG CGCCGATGGT GGCAATCGGG
ATGTTTTCCG GCTACTGCGG CACCCTTCTC ACGCCCATGG CCGCGAACTA CAACATTGTG
CCCGCGGCGC TGCTCGAACT GCCCGACAAG TATGGCGTGA TCCGCGCGCA GGTGCCTACC
GCGCTTGTCC TGCTGGTCAT CAACATTTTT TTGTTGAACA CTCTGATGTA CATATAG
 
Protein sequence
MILSLNVLFW LLGILLVVIG GLIVGDRAHP KRFFAGGFWI VYGLIFLVGD RLPADVVGVL 
VVAMALVAGF GGVVGARPRL RSDDERRASA QRLGNQLFLP ALTIPFVTVI GTLLTPHLVF
GGIALIDPKN ATLVSFGVGC VVALVLACRL TRDTLGQAVK EARRLVDSLS WAVVLPQMLG
MLGLVFADAG VGKAVAHLTT SYIDLDYRFV AVVVYCAGMA LFTIIMGNGF AAFPVMTGGV
GVPVLIGVFH GNPAPMVAIG MFSGYCGTLL TPMAANYNIV PAALLELPDK YGVIRAQVPT
ALVLLVINIF LLNTLMYI