Gene Bxe_C0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0001 
Symbol 
ID4009808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp477 
End bp1370 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID637952659 
Producthypothetical protein 
Protein accessionYP_555279 
Protein GI91780072 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.840453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGCA TCGCCGGTCT GTTTGGATCG GCGGCGCAGC GATCGGCCGG CTCGGCGTGG 
CTGCTGTTCG CCGGATGCGG CGTGCTGCAG GTCGCCCTCA GCTATCTGTT CTGTACCCCG
CTCGAACGGT TCTGGCCACT GTTGCGCTGG CCGGTCCGGC AACCGATGGC GACCGACATC
GTCTACACGT TCATCGTCCG GATCGTACTT TTTCCGCTCG CCGCTTACTT CGAGTACGGA
CTCGTGAAAG CGCTGGTCGA GCGCTGGCTG CTCGCGCATC AGTGGCCGGT GCCGTCTTTG
CTCACACGCA TCGCGGACGT CGCGGGGACG CCGCTCGCCG GCTTCCTGAT CGGGTTCGTG
ATACTCGACT GTGCCGATTA CTGGCGGCAC CGGATCTCGC ATCGTCTGGG CTGGTGGTAT
GGGCTGCATA CGCTACATCA TGCCGAGCTG CAGATGACGT TCTGGTCTGA CGACCGCTCG
CACCTGCTCG AGGACATCAT CACGTACGTG TGGCTTTTCG TCGTCGCGAT CGCGATCGGG
ATGCCGGCGC TGCAGTTTCC GTTCGTGATT CTCGGGTTTC GTTTCGTTGG CAGCTTTGCG
CACGCGAATA CGCGCGCCCG CTACGGATGG CTAGGCGAGA GACTGCTGAT CTCGCCGCAA
TTCCACCGCG CGCATCACTG CCCTGAGATT GCGAGGCGCA AGAGCTGTAA TTTCGGCACC
GTGTTGCCGT GGTGGGACAT GCTGTTCGGC ACCGCGAATT TTACCCACGA CGCGCGCGAG
ACCGGAGACC CGACCGCAGA TCAGATCATC GCAACGGGCA ACTGGTGGCA GCAGCATGTG
GGCGGCGTGC GCCGGATGAT CCAGCTCGCG CGCAGGCGAC GCCCGGCCCA TTGA
 
Protein sequence
MSCIAGLFGS AAQRSAGSAW LLFAGCGVLQ VALSYLFCTP LERFWPLLRW PVRQPMATDI 
VYTFIVRIVL FPLAAYFEYG LVKALVERWL LAHQWPVPSL LTRIADVAGT PLAGFLIGFV
ILDCADYWRH RISHRLGWWY GLHTLHHAEL QMTFWSDDRS HLLEDIITYV WLFVVAIAIG
MPALQFPFVI LGFRFVGSFA HANTRARYGW LGERLLISPQ FHRAHHCPEI ARRKSCNFGT
VLPWWDMLFG TANFTHDARE TGDPTADQII ATGNWWQQHV GGVRRMIQLA RRRRPAH