Gene Bxe_B2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2972 
Symbol 
ID4006877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp60092 
End bp60652 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID637949737 
Productputative fimbrial subunit 
Protein accessionYP_552373 
Protein GI91777165 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAT CCCTCCCCGC AATCGCGATC GCAGCTAGCA GTCTGTTCGG TCTCGTACCC 
CTTGGCGCCC ATGCGGCGGA CGGCACGATC TCGATCACCG GCACCGTAAC GGATAGCACG
TGTTCGATCA ACGGCAATGC GAACGGTACC CCGGCCGACA AGGCGATCAC GCTGGCGACG
GTTCCGGCCG GTTCGCTTGC GTCGGCAGGC GCGGTGGCCG GCACGTCCAA CCCGACCGAT
CTGCAACTGA GCCTGACCGG CTGCACTGGC ACGGCCACGA AGGCGATTGC GCGCTTCGAG
AACGGCCCGA CGGTCGACCA GACGAATGGC TATCTGTCGA ACACGGCGGG TACCGCGCAA
AACGTGGAAG TTCGTCTGCT CAACGCGCAG ATGCAGCCGA TCAACGTCAC GACGGGCGCG
AACAACGATA TAACGACGAA CGCGGCAACC ATCTCGGGCG GCGCGGCGAC GCTGCAGTAT
TTCGCACAGT ATTACGCAAC GGGCGTTGCG ACTGCCGGCA CGGTTAGCTC GTCGGTTCAA
TACTCGATGG AATATCAGTA A
 
Protein sequence
MKLSLPAIAI AASSLFGLVP LGAHAADGTI SITGTVTDST CSINGNANGT PADKAITLAT 
VPAGSLASAG AVAGTSNPTD LQLSLTGCTG TATKAIARFE NGPTVDQTNG YLSNTAGTAQ
NVEVRLLNAQ MQPINVTTGA NNDITTNAAT ISGGAATLQY FAQYYATGVA TAGTVSSSVQ
YSMEYQ