Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2933 |
Symbol | |
ID | 4006819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 108660 |
End bp | 109757 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637949776 |
Product | spermidine/putrescine ABC transporter ATPase |
Protein accession | YP_552412 |
Protein GI | 91777204 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.927824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCG ATGACGTGAT CGTCAGCTTT CGAGGTGTGC GCAAGACGTA CGACGGAGAA ACGCTGGTCG TCAAACAACT TGATCTGGAT ATATACCAAG GCGAATTTCT GACGCTGCTC GGGCCGTCCG GATCAGGGAA AACCACCTGT CTGATGATGC TGGCGGGTTT TGAATTTCCC ACCGGCGGCG AAATCTGGCT GGACGGCACG CTGCTCAACA CCGTGCCCCC GCATAAGCGC AACATCGGCA TGGTGTTTCA GAACTATGCG CTGTTTCCGC ATCTGACGGT TGAACAGAAC GTTGCATATC CGTTGACCGT GCGCAAGATT TCGGCGCAGG AACGCGCGCA TCGCACCAAC AACGCGTTGA AGATGGTGCG CATGGAGAGC TTTGCAAAGC GCTATCCGGC GCAACTCTCC GGCGGCCAGC AGCAGCGTAT CGCGCTCGCC CGTGCGCTGG TGTTCGAGCC GAAGCTCGTG CTGATGGACG AGCCGCTCGG CGCGCTGGAC AAACAGTTGC GCGAACACAT GCAGTACGAA CTTAAATCAT TGCACGAGAA ACTCGGCGTG ACGTTTGTGT ACGTCACGCA CGATCAGGGC GAGGCGCTGA CCATGTCGGA TCGCGTGGCC GTGTTCGACA AAGGCATCGT GCAGCAACTC GATACCGTCG ATCGTCTGTA CGAATCGCCG TGCAACGAGT TCGTGGCGAA CTTTATCGGC GACAGCAACA GGCTGCGCGG CACGATCGCG AATGTCGATG GTGAGTATTG CGAATTCCGG TTGAGCGACG GCACGCGTCT TACTGGGCGC AACATCGGCG GGGCGCGGGC GGGCACGCCG GCGGTCGCGT GTATTCGGCC CGAGCGCATG AAGCTCGCCA ACGGCCTGTC ACGGCCCGGC GCCAATGCGC TCGCCGGTGA GGCGCGCGGG CTGATCTATT TCGGCGACCA CGTGCGCATG CGCTGTGGTT TGCCGCAACA GGACGAGTGC TTCGTCAAGG TGCCGCTCGG CACCGACGCG CTCGACACCT TCGCGCCCGG CGCGCCGGTC GCGCTGGAGT TCGCACCCGA GCATCTGCGG GTTTTCGCGG GAGCGTGA
|
Protein sequence | MKTDDVIVSF RGVRKTYDGE TLVVKQLDLD IYQGEFLTLL GPSGSGKTTC LMMLAGFEFP TGGEIWLDGT LLNTVPPHKR NIGMVFQNYA LFPHLTVEQN VAYPLTVRKI SAQERAHRTN NALKMVRMES FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE LKSLHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDRLYESP CNEFVANFIG DSNRLRGTIA NVDGEYCEFR LSDGTRLTGR NIGGARAGTP AVACIRPERM KLANGLSRPG ANALAGEARG LIYFGDHVRM RCGLPQQDEC FVKVPLGTDA LDTFAPGAPV ALEFAPEHLR VFAGA
|
| |