Gene Bxe_B2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2931 
Symbol 
ID4006821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp110992 
End bp112260 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content62% 
IMG OID637949778 
Productspermidine/putrescine ABC transporter inner membrane protein 
Protein accessionYP_552414 
Protein GI91777206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CTGCCGATTC GACGCCTGAA TCAAGCGGCC GGCTCAAGCG CGAGTTGAGA 
GCCGCGGAGT CCAGAAAGCG GGCCGTGGCC CTGCTGCTGA TCGCACCGCT CGCAATCTTT
CTGTTATTGA TTTTCGTCGT GCCAATCGGC GCGCTGCTCA CGCGCGCCGC GCAGAATCCC
GAAGTCGTCA ACGCACTGCC GCATACGCTG ACGGCATTGA GCGCGTGGGA CCGCAAGACC
CCGCCGCCGG ATGCCGCGTA TGTCGCCCTC GCTACCGACC TCGCCGCGGT CGCCGACAGC
GACGGCATGG GCGCGCTCGC GCGCCGCCTG AACGTCGAGA TTCCGGGTTA TCGCTCGCTG
ATCGCCAAGT CAGCGCGCGC CATGCCGTTC GTCGACGACA ACAGCAAACC CTTGCAACTG
ACGCCTGCCC AGGTCCACGC CAAATTCGTC GAGCTGGACG AACGCTGGAA CGATATCGCC
TACTGGCAAA CCATTGCAAA AAATTCGAGC GCGTACTCGC CGTTCTATCT GCTCGCTTCG
CTGGATCACA AGCAGGACGC GTTCGGCCAC GTCATTCCGA CCGATCCCGA GCAACAGATC
TATCTCGCCG TGTTCAGCCG CACCTTTGTG ATCGGCGCGG CGGTGACCTT CTTCGCGCTG
CTGCTCGGCT ACCCGCTCGC ATACTGGATT TCGACGCTGC CCGAACGTCG CGCGAATCTG
GTGATGATTC TCGTGCTGAT TCCATTCTGG ACCTCGATTC TCGTGCGCGT GGCGGCGTGG
ATCGTGATTC TGCAAAGCGA AGGGCTGGTG AACAAGGCGT TGATCGGCAG CGGGCTGCTG
CATGATCCGC TGTCGTTGCT GTTCAACCGC ACCGGCGTCT ACATTTCGAT GACGCATATT
CTGCTGCCGT TCATGATCCT GCCGCTCTAT AGCGTGATGA AGTCGATCCC GCCGACCTAT
CAGCGCGCCG CGGTCTCGCT CGGCAGCCAT CCGTTCGCCG CGTTCTGGCG CGTGTACGTG
CCGCAAACCT ATCCGGGCAT CGGCGCGGGC GCGTTGCTGG TGTTCATTCT GGCGATCGGC
TATTACATTA CGCCGGCGTT GCTGGGTGGA CCGAACGATC AGATGGTCAG CTACTACGTC
GCGTACTACA CCAACGTGAC GATCAACTGG GGCATGGCGT GCGCGCTCGG CGGCTTGCTG
CTCGCCGCGA CGCTCGTGCT GTACGTCATT TACGGGCGCT TCACGCGTTC GTCATTGAGC
CTCGGCTGA
 
Protein sequence
MTIAADSTPE SSGRLKRELR AAESRKRAVA LLLIAPLAIF LLLIFVVPIG ALLTRAAQNP 
EVVNALPHTL TALSAWDRKT PPPDAAYVAL ATDLAAVADS DGMGALARRL NVEIPGYRSL
IAKSARAMPF VDDNSKPLQL TPAQVHAKFV ELDERWNDIA YWQTIAKNSS AYSPFYLLAS
LDHKQDAFGH VIPTDPEQQI YLAVFSRTFV IGAAVTFFAL LLGYPLAYWI STLPERRANL
VMILVLIPFW TSILVRVAAW IVILQSEGLV NKALIGSGLL HDPLSLLFNR TGVYISMTHI
LLPFMILPLY SVMKSIPPTY QRAAVSLGSH PFAAFWRVYV PQTYPGIGAG ALLVFILAIG
YYITPALLGG PNDQMVSYYV AYYTNVTINW GMACALGGLL LAATLVLYVI YGRFTRSSLS
LG