Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2931 |
Symbol | |
ID | 4006821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 110992 |
End bp | 112260 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637949778 |
Product | spermidine/putrescine ABC transporter inner membrane protein |
Protein accession | YP_552414 |
Protein GI | 91777206 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG CTGCCGATTC GACGCCTGAA TCAAGCGGCC GGCTCAAGCG CGAGTTGAGA GCCGCGGAGT CCAGAAAGCG GGCCGTGGCC CTGCTGCTGA TCGCACCGCT CGCAATCTTT CTGTTATTGA TTTTCGTCGT GCCAATCGGC GCGCTGCTCA CGCGCGCCGC GCAGAATCCC GAAGTCGTCA ACGCACTGCC GCATACGCTG ACGGCATTGA GCGCGTGGGA CCGCAAGACC CCGCCGCCGG ATGCCGCGTA TGTCGCCCTC GCTACCGACC TCGCCGCGGT CGCCGACAGC GACGGCATGG GCGCGCTCGC GCGCCGCCTG AACGTCGAGA TTCCGGGTTA TCGCTCGCTG ATCGCCAAGT CAGCGCGCGC CATGCCGTTC GTCGACGACA ACAGCAAACC CTTGCAACTG ACGCCTGCCC AGGTCCACGC CAAATTCGTC GAGCTGGACG AACGCTGGAA CGATATCGCC TACTGGCAAA CCATTGCAAA AAATTCGAGC GCGTACTCGC CGTTCTATCT GCTCGCTTCG CTGGATCACA AGCAGGACGC GTTCGGCCAC GTCATTCCGA CCGATCCCGA GCAACAGATC TATCTCGCCG TGTTCAGCCG CACCTTTGTG ATCGGCGCGG CGGTGACCTT CTTCGCGCTG CTGCTCGGCT ACCCGCTCGC ATACTGGATT TCGACGCTGC CCGAACGTCG CGCGAATCTG GTGATGATTC TCGTGCTGAT TCCATTCTGG ACCTCGATTC TCGTGCGCGT GGCGGCGTGG ATCGTGATTC TGCAAAGCGA AGGGCTGGTG AACAAGGCGT TGATCGGCAG CGGGCTGCTG CATGATCCGC TGTCGTTGCT GTTCAACCGC ACCGGCGTCT ACATTTCGAT GACGCATATT CTGCTGCCGT TCATGATCCT GCCGCTCTAT AGCGTGATGA AGTCGATCCC GCCGACCTAT CAGCGCGCCG CGGTCTCGCT CGGCAGCCAT CCGTTCGCCG CGTTCTGGCG CGTGTACGTG CCGCAAACCT ATCCGGGCAT CGGCGCGGGC GCGTTGCTGG TGTTCATTCT GGCGATCGGC TATTACATTA CGCCGGCGTT GCTGGGTGGA CCGAACGATC AGATGGTCAG CTACTACGTC GCGTACTACA CCAACGTGAC GATCAACTGG GGCATGGCGT GCGCGCTCGG CGGCTTGCTG CTCGCCGCGA CGCTCGTGCT GTACGTCATT TACGGGCGCT TCACGCGTTC GTCATTGAGC CTCGGCTGA
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Protein sequence | MTIAADSTPE SSGRLKRELR AAESRKRAVA LLLIAPLAIF LLLIFVVPIG ALLTRAAQNP EVVNALPHTL TALSAWDRKT PPPDAAYVAL ATDLAAVADS DGMGALARRL NVEIPGYRSL IAKSARAMPF VDDNSKPLQL TPAQVHAKFV ELDERWNDIA YWQTIAKNSS AYSPFYLLAS LDHKQDAFGH VIPTDPEQQI YLAVFSRTFV IGAAVTFFAL LLGYPLAYWI STLPERRANL VMILVLIPFW TSILVRVAAW IVILQSEGLV NKALIGSGLL HDPLSLLFNR TGVYISMTHI LLPFMILPLY SVMKSIPPTY QRAAVSLGSH PFAAFWRVYV PQTYPGIGAG ALLVFILAIG YYITPALLGG PNDQMVSYYV AYYTNVTINW GMACALGGLL LAATLVLYVI YGRFTRSSLS LG
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