| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2893 |
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| Symbol | sdhA |
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| ID | 4006742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 156332 |
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| End bp | 158107 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637949816 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_552452 |
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| Protein GI | 91777244 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA TCAAGAATTC TCTGCCGCGT CGCAAGTTTG ACGTGGTTAT CGTCGGCGCA
GGCGGCTCGG GGATGCGCGC TTCGCTGCAA CTCGCGCGCG CCGGTCTGTC GGTCTGCGTG
CTGTCCAAAG TGTTCCCGAC GCGTTCGCAC ACGGTTGCTG CCCAGGGCGG CATCGGCGCT
TCGCTCGGCA ACATGAGCGA AGACAACTGG CACTATCACT TCTACGACAC GATCAAGGGT
TCCGACTGGC TCGGCGACCA GGACGCGATC GAGTACATGT GCCGCGAAGC GCCGAACGCA
GTCTACGAAC TCGAACACTT CGGCATGCCG TTCGACCGTA ATGCAGACGG CACGATTTAC
CAACGCCCGT TCGGCGGCCA TACCGCGAAC TACGGCGAAA AGCCGGTGCA ACGCGCTTGC
GCGGCCGCCG ACCGTACCGG TCACGCGCTG CTGCACACGC TGTACCAGCA GAACGTGGCG
GCCAAGACGC AGTTCTTCGT CGAATGGATG GCGCTCGACC TGATCCGCGA CGCCGAAGGC
GACGTGCTCG GCGTGACCGC GCTGGAAATG GAAACCGGCG ACGTCTACAT TCTCGAAGGC
AAGACCACGC TGTTCGCCAC GGGCGGCGCG GGCCGCATTT TCGCGGCTTC CACGAATGCA
TTCATCAACA CGGGTGACGG CCTGGGCATG GCCGCGCGTT CGGGCATCGC ACTGCAAGAC
ATGGAATTCT GGCAATTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GATTACCGAA
GGCGTGCGCG GCGAAGGCGG CATTCTGCGC AACTCGAACG GCGAGCGTTT CATGGAACGC
TACGCGCCTA CTTTGAAGGA TCTGGCGCCG CGCGACTTCG TGTCGCGTTC AATGGACCAG
GAAATCAAGG AAGGCCGCGG CGTGGGTCCG AACAAGGATC ACGTGCTGCT CGACCTGTCG
CACATCGGCG CCGAGACGAT CATGAAGCGT CTGCCGTCTA TCCGCGAAAT CGCGCTGAAG
TTCGCGAACG TCGATTGCAT TAAAGAGCCG ATCCCGGTCG TGCCGACCAT CCACTATCAG
ATGGGCGGTA TTCCGACGAA CATTCACGGC CAGGTGGTGG GCACGTCGAA GGGCGCGGAA
GATCCGGTCA ACGGTTTCTA CGCAGTGGGC GAATGCTCGT GCGTGTCGGT GCATGGTGCG
AACCGTCTCG GCACGAACTC GCTGCTCGAC CTGGTGGTGT TCGGCCGCGC GGCCGGCAAC
CACATCGTCA AGCACGTGAA GGAAATCAAG GAGCACAAGC CACTGCCGGC CGACGCCGCT
GATTTCGCAC TGTCGCGTCT GGCTAAGCTC GATAGCTCGT CCTCGGGCGA GTACGCGCAA
TCGGTCGCGA ACGACATTCG CGGCACGATG CAGAAGCACG CCGGTGTGTT CCGTACCTCG
GCGTTGCTGG CTGAAGGCGT CGAGCGCATC CGCGAAGTGG CCGACCGCGT CGACAACATC
CATCTGAAGG ACAAGTCGAA GGTGTTCAAC ACGGCGCGTA TCGAAGCGCT GGAAGTGGCG
AACCTGATCG AAGTGGCACG CGCCACGATG GTTTCCGCCG AAGCGCGCAA GGAAAGCCGT
GGCGCGCACG CGCAGGACGA CTTCGAACAT CGCGACGACG AAAACTGGCT GCGCCATACG
CTGTGGTTCA GCAAAGGCGA TCGCCTCGAC TACAAGCCGG TTCACATGCA ACCGCTGACG
GTCGAATCGG TTCCGCCGAA AGCGCGGACC TTCTAA
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| Protein sequence | MAAIKNSLPR RKFDVVIVGA GGSGMRASLQ LARAGLSVCV LSKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EYMCREAPNA VYELEHFGMP FDRNADGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVA AKTQFFVEWM ALDLIRDAEG
DVLGVTALEM ETGDVYILEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARSGIALQD
MEFWQFHPTG VAGAGVLITE GVRGEGGILR NSNGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDCIKEP IPVVPTIHYQ
MGGIPTNIHG QVVGTSKGAE DPVNGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN
HIVKHVKEIK EHKPLPADAA DFALSRLAKL DSSSSGEYAQ SVANDIRGTM QKHAGVFRTS
ALLAEGVERI REVADRVDNI HLKDKSKVFN TARIEALEVA NLIEVARATM VSAEARKESR
GAHAQDDFEH RDDENWLRHT LWFSKGDRLD YKPVHMQPLT VESVPPKART F
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