Gene Bxe_B2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2888 
SymbolleuD 
ID4006747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp162488 
End bp163141 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID637949821 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_552457 
Protein GI91777249 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.175281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TCATCGTACA CACCGGCGTC GTGGCGCCGC TCGATCGCGA AAACGTCGAC 
ACGGACGCGA TCATTCCGAA GCAATTCCTG AAGTCGATCA AGCGCACGGG TTTCGGTCCG
AACGCGTTCG ACGAATGGCG CTACCTCGAC CACGGCGAGC CGGGTCAGGA CAATTCGCAG
CGCCCGCTGA ATCCGGACTT CGTGCTGAAC CAGCCGCGTT ATCAAGGTGC TTCGGTGCTG
TTGGCGCGCA AGAACTTCGG CTGCGGCAGT TCGCGTGAGC ACGCGCCGTG GGCGTTGGAG
CAATATGGCT TTCGCGCGCT GATCGCGCCG AGCTTCGCCG ACATTTTCTA CAACAACTGC
TTCAAGAACG GCGTGTTGCC GATCGTGCTG ACCGAACAGC AAGTCGATCA CCTGTTCAAC
GAAACGTATG CGTTCAACGG CTTCAAGCTG ACGGTCGATC TCGAAGCGCA AGTCGTGCGC
ACGGCGGACG GCGGCACCGA ATATCCGTTC GAAGTCGCGG CGTTCCGCAA GTACTGCCTG
CTGAACGGCT TCGACGACAT CGGTCTCACG CTGCGTCACG CGGACAAGAT CCGCCAGTTC
GAAGCGGAGC GGATCGCGAA GCAGCCGTGG CTGGCTCACC GCATCGTCGG TTAA
 
Protein sequence
MEKFIVHTGV VAPLDRENVD TDAIIPKQFL KSIKRTGFGP NAFDEWRYLD HGEPGQDNSQ 
RPLNPDFVLN QPRYQGASVL LARKNFGCGS SREHAPWALE QYGFRALIAP SFADIFYNNC
FKNGVLPIVL TEQQVDHLFN ETYAFNGFKL TVDLEAQVVR TADGGTEYPF EVAAFRKYCL
LNGFDDIGLT LRHADKIRQF EAERIAKQPW LAHRIVG