| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2865 |
|---|
| Symbol | |
|---|
| ID | 4006770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 190259 |
|---|
| End bp | 192181 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949844 |
|---|
| Product | putative trehalose trehalohydrolase |
|---|
| Protein accession | YP_552480 |
|---|
| Protein GI | 91777272 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.944811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA GTCCGATTGA TCCTCATGCG CATCATCACG CGCACTGTTT GCCGTTCGGC
GCGCAACTGA TCGGCGCGAC GGGCGCGAAG CCGCGCACGC GGTTTCGCTT CTGGGCGCCG
TCCTGCAAGC ACGTTCAGGT GGAAATCGAA AACGGACCCG CGCAAGGCGC GCACGACATG
ACGCCCGCCG GCAATGGCTG GTTCGAAGCC AGCGTCGACA GCGGCGCGGG CACGCTGTAT
CGCTTCCGGC TGGACGGCGA GCATGCGGTG CCCGATCCCA CGTCACGCTT CCAGCCGCAG
GACGTGCACG GGCCGAGCGA AGTCATCGAT CCGCGCGCGT ACCGCTGGCA ACAGACGAAC
TGGCATGGCC GGCCGTGGGA AGAAACGGTG TTGTACGAGT TGCACGTCGG CGCGCTGGGC
GGTTATGCGG GCGTGCAGAA GCGCCTGCCT GAGCTCGCCG CGCTCGGCGT CACCGCCATC
GAACTGATGC CGCTGAACGA CTTTCCCGGC AAGCACAATT GGGGCTACGA CGGCGTGTTG
CCCTATGCGC CCGACTCCGC GTACGGCCGC CCCGAAGATC TGAAAGCGCT GATCGACGCC
GCGCATGGTC TCGGCCTCAT GGTGTTTCTC GACGTGGTCT ATAACCACTT CGGACCGGAC
GGCAATTATC TGCACGAGTA CGCCCGCTCG TTTTTCCGCG AAGGCACGCA TACGCCGTGG
GGCCCGGCCA TCGATTTCGA GCGCAGTGAA GTGAGCGATT TCTTTACCGA TAACGCTGTT
TACTGGATCA ACGAATATCG TATCGACGGA CTGCGTTTCG ACGCGGTGCA CGCCATCGAC
AATCATGCCT GGCTGCGCGA ATTGTCCGAT CATATCCGCG CCAGGGTGCA GCACGGCCGG
CATGTGCATC TGGTGCTGGA AAACGAACAC AACAGCGCGA ACCTGCTGGA AACCCATTTC
GACGCGCAGT GGAACGACGA CGCGCACAAC ACCTTGCACG TGCTGCTGAC CGGCGAAACG
GAAGGCTATT ACCACGCGTA TGAGGACCAG CCGATCCGCC GGCTCGCGCG CGTGCTGTCG
GAAGGCTTCG CGTATCAGGG CGACCCGTCG CCGATTCATG ACGGCAAGCC GCGCGGCGAA
GCAAGCGCGC ATCTACCACC GACTTCTTTC GTGATGTTCC TGCAGAACCA CGATCAGGTC
GGCAACCGCG CGTTCGGCGA GCGGCTGCGC AAACTGACCT CGGACGAAGC GTTGCGCGCC
GCCACCGGTT TGCTTCTGCT GTCGCCGCAA ATCCCACTGC TCTTCATGGG CGAGGAATAC
GGCTCCACGC AGCCCTTCCT GTTTTTCACC GACTACACGG GCGATCTCGC CGACGCGGTC
CGCGAAGGCC GGCGCCGTGA ATTCGCGCGT TTTTCATCGT TCAGCGACGA GAAACGGCGC
GCGCAGATTC CCGATCCGAA CGACGTGAAA ACCTTCGCGG CCTCGTCGCC GCCCGCGCCG
GACGAAACGT CGCAGCACAC CGACGCTGAA GCAAAAGACC GGCTCGACTG GATGCACTTC
TACAAATCCG CGCTGGCCGT ACGCGCCAGG CTGATCACAC CGCGCCTGAA ACACAGCAAG
GCGTGCGGCG CGACGGTGCT GAGCGCTGCG AACGGCGGCG ATGCCAATGC GCTGATCGCC
CGCTGGAAAC TCGGCGACGG CGAGACTTTG TCGATCGCGC TGAACCTCTC GAAGGAAAAC
GTCGCGCTGG CCGACCTGCC GGCCGGCAAA GTGATTTTCG AAACGCCGCC GCGCGTGCGC
GAACAGGTCG ACGTCAAGGT GTTGCCCGCG CACGCGTTCG TCGCGTGGCT GACCGGCGAC
GTCAGCGGCT ATGCCATCCG CCACGATGCG CGCATTGCCG GCCAACAGGA GCGCCACGCG
TGA
|
|---|
| Protein sequence | MSESPIDPHA HHHAHCLPFG AQLIGATGAK PRTRFRFWAP SCKHVQVEIE NGPAQGAHDM
TPAGNGWFEA SVDSGAGTLY RFRLDGEHAV PDPTSRFQPQ DVHGPSEVID PRAYRWQQTN
WHGRPWEETV LYELHVGALG GYAGVQKRLP ELAALGVTAI ELMPLNDFPG KHNWGYDGVL
PYAPDSAYGR PEDLKALIDA AHGLGLMVFL DVVYNHFGPD GNYLHEYARS FFREGTHTPW
GPAIDFERSE VSDFFTDNAV YWINEYRIDG LRFDAVHAID NHAWLRELSD HIRARVQHGR
HVHLVLENEH NSANLLETHF DAQWNDDAHN TLHVLLTGET EGYYHAYEDQ PIRRLARVLS
EGFAYQGDPS PIHDGKPRGE ASAHLPPTSF VMFLQNHDQV GNRAFGERLR KLTSDEALRA
ATGLLLLSPQ IPLLFMGEEY GSTQPFLFFT DYTGDLADAV REGRRREFAR FSSFSDEKRR
AQIPDPNDVK TFAASSPPAP DETSQHTDAE AKDRLDWMHF YKSALAVRAR LITPRLKHSK
ACGATVLSAA NGGDANALIA RWKLGDGETL SIALNLSKEN VALADLPAGK VIFETPPRVR
EQVDVKVLPA HAFVAWLTGD VSGYAIRHDA RIAGQQERHA
|
|---|
| |