| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2863 |
|---|
| Symbol | |
|---|
| ID | 4006772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 194628 |
|---|
| End bp | 196838 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637949846 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_552482 |
|---|
| Protein GI | 91777274 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC ATGATCCGGC CGCAGGCCTC CAACCGCTCG ATATCGACGC GCTCGTCGAA
GCGCGCCACC CCGATCCTTT TTCGCAGCTC GGGCTGCATC ACACGGATGC GGGTCCGGTG
GTGCGCGCGC TGTTGCCGAA CGCCGCGCAC GTCAGTGTGA TTTCTCGCGC CGACGGTGCG
TTACTCGGCG AGCTCGAACA ACTGCGGCCG GGGCTCTTTG CCGGCCGCAT CACGTCCGCG
GCGCCGTACC GTTTGCGCAT CGACTGGCAT GGCGTCGTGC AGGAAATCGA GGACACGTAT
TCGTTCGGTC CCGTTCTCGG CGATGAGCCG CTCGGCCGGC TCGCGGGCGG CGACCCTTAT
GCAGTGCTCG AATGTCTCGG CGCTCGCCCG ATGGAAGTGG ACGGCGTGCC GGGTGTGCGC
TTCGCCGTGT GGGCGCCGAA CGCCCGGCGC GTCTCGGTGG TAGGCGACTT CAATGCATGG
GACGGCCGCC GTCATCCGAT GCGGCTGCGG CATCAGGCCG GCGTGTGGGA GCTGTTCGTG
CCACGGGTCG GGCCAGGTAC GCGCTACAAA TACGAACTGC TGTCGCGCGA CGGCCATCCG
CTGCCGTTGA AGGCCGATCC GTGCGCGATG CAAACCGAGA AGCCGCCGGG TACGGCCTCG
ATCGTCGCGC ATGTCGACGA GGTCGAGCAG TTTCCGTGGA GCGATCACGA GTGGATCCAG
TCGCGCGCCG GCAAACAGAC CGCGCGCTCG CCCATTTCGA TCTACGAAGT GCACGCCGAA
TCCTGGCTGC GCGTCGCGGA AGAAGGCCAG CGCGGGCTCG ATTGGGAAGA GCTCGCGGAA
CGGATGATTC CGTACGTGAA AAGCATGGGC TTCACACACG TGGAGTTCAT GCCGATTGCG
GAGCATCCGT TCGGCGGATC GTGGGGCTAT CAGCCACTCG GGCAATTCGC GCCGTCGGCG
CGCTTCGGCA AACCCGAGCA GTTCGCGAGA TTCGTCGACA AGGCGCACGA AGCCGGACTC
GGCGTGATCC TCGACTGGGT GCCCGCGCAC TTTCCAAACG ACGCGCACGG CCTGATCGAC
TTCGACGGCA CGCCGCTCTA CGAGCACGCC GACCCGCGCG AAGGCTATCA CCAGGACTGG
AACACGATGA TCTACAACCT CGGCCGCAAC GAGGTGAGCG CGTTCCTGAT CGCCTCCGGG
CTGGCGTGGC TCAAGCGCTA TCACGTCGAC GGTTTGCGCG TGGATGCGGT CGCGTCGATG
CTGTATCGCG ACTATTCGCG CGCCGCCGAC CAGTGGGTGC CGAACATTTA CGGCGGCCGC
GAGAATCTCG AATCGATCGC CTTCCTCAAG CGCCTGAATC ATGAAGTGGG CTATGTGCCC
GGTGTGCCGG GCGCGATCAC GATCGCCGAG GAATCGACCG CATGGCCGGG CGTGACGGCG
CGTGTCGAAG ACGGCGGCCT GGGTTTCCAG TTCAAGTGGA ACATGGGCTG GATGCACGAC
ACGCTGCACT ACATGGAAGA AGATCCGGTC TACCGCCAAT ACCATCACCA CAACATGACG
TTCGGCATGG TGTACGCGTA TTCGGAGCGC TTCGTGCTGC CGCTTTCGCA CGACGAGGTC
GTGCACGGCA AAGGCTCGCT GCTCGGCAAG ATGCCCGGCG ACAGGTGGCA AAAGTTCGCC
AACCTGCGCG CGTACTTCGG TTTCATGTGG ACGCACCCGG GCAAGAAGCT GCTGTTCATG
GGCGGCGAAT TCGGCCAGCT GGCGGAATTC AATCACGACG CGTCACCGCA TTGGCATCTG
CTCGACGATT CGAATCACCA CGGCGTGCAA ATGCTGGTGC GCGACCTGAA CCGTCTGTAT
AGCGACGAGC CCGCGCTGTA TCTGCTCGAT TGTGAGCCGG GCGGCTTCGA ATGGCTGATC
GGCGACGACA GCGGCAACAG CGTCTTCGCC TATCGCCGCA CCGACGGCGC CGGCCGCGAA
CTCGTCGTGG TCTGCAACAT GACGCCGGTG CCGAGGCTCG GTTACCGGAT CGGCATGCCG
CGCGGCGGAC GCTGGGTGGA AGTGCTCAAC ACGGACGCCG GCGTCTACGG CGGCTCGAAC
ATGGGCAACG GCGGGCTGAT CCATACCGAC TCCCAATCGA GCCACGGCTG GCCGCATTCC
GCGGCACTGA CGCTGCCGCC GCTCGCGACG ATCGTATTGC GCGCGGATTG A
|
|---|
| Protein sequence | MSEHDPAAGL QPLDIDALVE ARHPDPFSQL GLHHTDAGPV VRALLPNAAH VSVISRADGA
LLGELEQLRP GLFAGRITSA APYRLRIDWH GVVQEIEDTY SFGPVLGDEP LGRLAGGDPY
AVLECLGARP MEVDGVPGVR FAVWAPNARR VSVVGDFNAW DGRRHPMRLR HQAGVWELFV
PRVGPGTRYK YELLSRDGHP LPLKADPCAM QTEKPPGTAS IVAHVDEVEQ FPWSDHEWIQ
SRAGKQTARS PISIYEVHAE SWLRVAEEGQ RGLDWEELAE RMIPYVKSMG FTHVEFMPIA
EHPFGGSWGY QPLGQFAPSA RFGKPEQFAR FVDKAHEAGL GVILDWVPAH FPNDAHGLID
FDGTPLYEHA DPREGYHQDW NTMIYNLGRN EVSAFLIASG LAWLKRYHVD GLRVDAVASM
LYRDYSRAAD QWVPNIYGGR ENLESIAFLK RLNHEVGYVP GVPGAITIAE ESTAWPGVTA
RVEDGGLGFQ FKWNMGWMHD TLHYMEEDPV YRQYHHHNMT FGMVYAYSER FVLPLSHDEV
VHGKGSLLGK MPGDRWQKFA NLRAYFGFMW THPGKKLLFM GGEFGQLAEF NHDASPHWHL
LDDSNHHGVQ MLVRDLNRLY SDEPALYLLD CEPGGFEWLI GDDSGNSVFA YRRTDGAGRE
LVVVCNMTPV PRLGYRIGMP RGGRWVEVLN TDAGVYGGSN MGNGGLIHTD SQSSHGWPHS
AALTLPPLAT IVLRAD
|
|---|
| |