| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2828 |
|---|
| Symbol | |
|---|
| ID | 4006573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 234720 |
|---|
| End bp | 235601 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637949881 |
|---|
| Product | farnesyl-diphosphate synthase |
|---|
| Protein accession | YP_552517 |
|---|
| Protein GI | 91777309 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCG AACAATGGAT GCGCTCGGTG CTGGAGCGCG TCGAAACGGC ACTAGACCAT
TATCTGCCGG GCGAGGCCAC CGAGCCCGCC ACGCTGCATG AAGCCATGCG CTACGCGGTG
CTGGGCGGCG GCAAGCGGGT TCGCCCGCTG CTGTGCCACG CGGCTGGCGA ACTGACCGGC
GCGCGTGCCG AATGCCTCGA TGCGGCAGCC GCTGCGCTGG AAATGATCCA CGTGTACTCG
CTTGTCCACG ACGACATGCC ATGCATGGAC GACGACGCGC TGCGTCGCGG CAAGCCCACG
GTACACGTCA AGTATGACGA AGCCACGGCA TTGCTGGTCG GCGACGCGCT GCAATCGCAG
GCGTTCGTCG CGCTGACCTC GGACGTGCTC GCTCCGGCGC AACAGGCCGC GCTCGTGCGC
GAACTGGCGC TGGCGAGCGG CTCGGTCGGC ATGTGCGGCG GCCAGGCCAT CGACCTGGCG
AGCGTCGGCC ACACGCTGAC GCGCACGCAG CTCGAAACCA TGCACCGCAT GAAAACCGGT
GCCTTGCTGC GCGCCGCGGT GCGCATGGGC GCGCTGGCTG GCGAAACGCC GGACGCAGCG
GCCATGCGCT CGCTCGACGC ATATTCGGCT GCTGTCGGCC TCGCGTTTCA GGTTGTCGAC
GACATTCTCG ACGTCACGAC CGATTCCGCC ACGCTCGGCA AAACCGCAGG TAAAGACGCG
AAGGACGGCA AGCCGACCTA CGTGTCGATC ATTGGACTCG ACGCGTCGCG TGCGCTCGCA
GCGCAACTGC GCAGTGACGC TCACGCCGCG CTGGCGCCGT TCGGCGCACG CGCGCAGCGT
CTTGCCGAAT TGGCCGATCT GGTGGTGAAC CGGGTCAGCT GA
|
|---|
| Protein sequence | MTFEQWMRSV LERVETALDH YLPGEATEPA TLHEAMRYAV LGGGKRVRPL LCHAAGELTG
ARAECLDAAA AALEMIHVYS LVHDDMPCMD DDALRRGKPT VHVKYDEATA LLVGDALQSQ
AFVALTSDVL APAQQAALVR ELALASGSVG MCGGQAIDLA SVGHTLTRTQ LETMHRMKTG
ALLRAAVRMG ALAGETPDAA AMRSLDAYSA AVGLAFQVVD DILDVTTDSA TLGKTAGKDA
KDGKPTYVSI IGLDASRALA AQLRSDAHAA LAPFGARAQR LAELADLVVN RVS
|
|---|
| |