| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2803 |
|---|
| Symbol | |
|---|
| ID | 4006598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 262470 |
|---|
| End bp | 263552 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637949906 |
|---|
| Product | OmpC family outer membrane porin |
|---|
| Protein accession | YP_552542 |
|---|
| Protein GI | 91777334 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.011499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAAATGGTCT GTTTGGGGCC GTGATTGCTG TGTTCACGGT GGCGGCACAC
GCGCAAAGCA GCGTGACGCT ATATGGCAGT ATCGACGAAG GCGTCACCTA TACGAGCAAC
ATCAAGGGGC ACGGCACCGC CTCCGTTGGC CCTGTGGCGG TGCCTGACTT CTACGGCATT
CGCGGATCGG AAGACCTGGG CGGCCAGTTC AAGGCGATTT TCGCCCTGCA GAACGGTTTT
CTGTCGAGCA CGGGTGCCGG CACGATTGCG GGTGAGGCGT TCAGCCATTT CGCGTGGGTC
GGCCTGTCGA GCAATCGTTA CGGCGCGTTG ACGCTCGGTC GTCAACTGGA TCTCACAACG
GAAACGCTGC GTCTGGATTC GGACGGCAGC GTGCAGTACA CGTTCTATCT GTTCCACCCC
GCCAACCTGG ACAACCTCGG CATTCGCGGC GACTCGATCA ACAACTCGGT CAAGTACGCG
ACGGCGGATT TTCATGGTCT CAAGGCAGCC GTGCTCTACG GCTTCGACGA TACGTCGACG
CAGCCGGGGC GTGTCGTCAG TGCCGACGTG ATCTACACGA ACGGGCCGTT GCGTGCGTCG
GCGGTGTATA GCAGTTGGCG CAACCACTCG ATCGACGTAG GTTCGCAACT GGGGTATGCG
AGCTTTCTCG GTCAGTCGCT CGCGAAGGGC AGCGTCTTTC TCGCGAAGAA GCAGGACATT
GGCGGTCTTT CGGCAACATG GTCGGTCAAC CAGAATCTGG CGCTGCACGG CGTGCTTACG
CAAGTCAATC TGAGCAGCGA CTATGGTTCG GGCCGCATGA GAACCGTCGA GCTTGGCGCG
GATGTGCACA CGAGCGTGGC CAATATGGTG ACGCTCGGCG GATACGCGTC GTGGCTGACT
GGCACGCGCT ACACGGAAGT CGGCGTGGGC GACGTCTACT CGCTGTCGAA GCGCACGATT
GTCTACGCGC AGGCCGTGTA TCAGCACGCG CAAGGTTCCG GCAATGCGGC GATTCCGCTG
CTTTCGCCGT CGAACAGTCC TAACCAGACG GCGTTACGCG TGGGCGTGCA TCAGTTTTTC
TGA
|
|---|
| Protein sequence | MKKLNGLFGA VIAVFTVAAH AQSSVTLYGS IDEGVTYTSN IKGHGTASVG PVAVPDFYGI
RGSEDLGGQF KAIFALQNGF LSSTGAGTIA GEAFSHFAWV GLSSNRYGAL TLGRQLDLTT
ETLRLDSDGS VQYTFYLFHP ANLDNLGIRG DSINNSVKYA TADFHGLKAA VLYGFDDTST
QPGRVVSADV IYTNGPLRAS AVYSSWRNHS IDVGSQLGYA SFLGQSLAKG SVFLAKKQDI
GGLSATWSVN QNLALHGVLT QVNLSSDYGS GRMRTVELGA DVHTSVANMV TLGGYASWLT
GTRYTEVGVG DVYSLSKRTI VYAQAVYQHA QGSGNAAIPL LSPSNSPNQT ALRVGVHQFF
|
|---|
| |