Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2779 |
Symbol | |
ID | 4006505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 285567 |
End bp | 286202 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637949930 |
Product | amino acid efflux pump, RhtB family protein |
Protein accession | YP_552566 |
Protein GI | 91777358 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000004006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTT CGACCGCCAT CATCGCCATT CTCGCCGCAC TCCTCGTAGG CGCGATGAGT CCTGGACCGA GCTTCGTGAT CGTCGCCCGC AATGCGATCG GGTTGTCGCG CGGCGATGGT CTCGCCACCG CGATCGGCAT GGGCGTCGGC GGCGTTTTCT TCAGCGGCAT CGCGCTGCTC GGCCTCTACA CCTTGCTGGC GAGTGTCGAA TGGCTCTATG TCGGCCTGAA AGTGGCAGGC GGTCTTTATC TGATCTACCT TGCGTCGAAG ATCTGGCGCG GCGCGGCCAA ACCGCTCGCA TTCGATACGA CGCAGGCCGT CCCGGCCAAT GCCCGCAAGT CGTTCTGGAT CGGCTTGAGC ACACAACTCA GCAATCCGAA GACAGCCGTC TATTACGGCA GTATTTTCGC GGCCCTGTTG CCGCAACATC CGCCGCTGTG GTGCTACTTC GCATTGCCGC CCGCGATCTT CGCGATCGAA GCCGGCTGGT ACACCGTCGT CGCGTTGTGC TTTTCGAGCA AGCGGCCGCG CGAAATCTAT CTGCAATGGA AAGCGTGGGT CGATCGCGTC GCCGCGAGCG CGGTCGCCGC GCTGGGATTG CGCCTGATCC TGACGGCACA CAAAGTGGGC ATCTGA
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Protein sequence | MSASTAIIAI LAALLVGAMS PGPSFVIVAR NAIGLSRGDG LATAIGMGVG GVFFSGIALL GLYTLLASVE WLYVGLKVAG GLYLIYLASK IWRGAAKPLA FDTTQAVPAN ARKSFWIGLS TQLSNPKTAV YYGSIFAALL PQHPPLWCYF ALPPAIFAIE AGWYTVVALC FSSKRPREIY LQWKAWVDRV AASAVAALGL RLILTAHKVG I
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