| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2712 |
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| Symbol | |
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| ID | 4006689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 366562 |
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| End bp | 367944 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637949995 |
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| Product | putative TRAP-type uncharacterized transport system periplasmic ligand binding protein |
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| Protein accession | YP_552631 |
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| Protein GI | 91777423 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.784472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.536784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCCCG TCCGGAGCAC GGACCAGAGA GACCAAACCG TGCCAAGGCA CAACCCAGTT
CTCCAGCGCG CCCGGAAGGC ACCCGTAAAA CCCAGGCGCC CGTGGCTCTT CATCACGGGC
GCGATCCTGC TGCTGGCCGT GTCAGGCTGG GTGCTGGCAA TCATTCTCGC GCCTGCATTT
CAGCATACGA TCGTTGTGAC GTCTGGAGCC GACGGCGGAA TCTATCGCGG CTTTGCCGAC
CGCTACGCGC CGATCCTGAA ACAGAAAGGC ATCACGCTCG ATATCCGTAG TTCTTCCGGT
TCAGTCGAAA ACTATCAGCG GCTGAAGGAC CCACGCAGCG AATACCAGGT CGGCTTTATC
CAGTCCGGCA CGACTCGCCC GAAAGAAACC GACGACCTGA AAACGATCGC CGCGGTCTCG
TACGAACCGA TCTGGGTCTT CTATCGCGGC GACACTACGA TCGACCGGTT GGCGCAACTG
CGCGGCGAAC GCATTTCCAT CGGCGTGCCG GGCAGCGGCC TGCTCAACGT TGCCCTGCAA
CTGCTCGCCT ACAGCGGCGT TTCAGGCGAC AACACCACAC TGTTGCAAAT GGACGCGGCC
AAGGCTTATC AAAGTCTGGA AAACGGACAA CTCGATGCGG CGTTCTTTAT CGGCAGGCCG
GATGCCGAGA TGCAACGAAC CCTGCTGAAC AGCAATCTGA AGCTGATGAG CTTTGCTCAG
GCCGACGCGC TGGTCCAAAA ATTTCCGTCA CTCTCCAAGG TCATTTTTCC GCGTGGCTCG
ACGAGCATTG CCAACGATCG CCCGTCAGCC GATGTCACCC TGCTCGCCGC CACGGCTTTG
CTCGTGGCCA AGGAATCCCT GCATCCAGCC TTCGTCTATC TGTTGCTGGA TGCAGCCAGC
GCTGTTCACG GCCGTGAAGA TTACTTCACG CCGCTCGGTA AGTTTCCCAA CGTCAACACC
GACGAATTTC CTGTTTCCGA TGAAAGCATC CGCTATTTCA AGTCTGGGCG CCCCTTCCTT
CAGCGCTACC TCCCGTTCTG GCTGGCCAGT TTTGTCGAAC GGCGTCTTCT GATCCTGCTG
CCTTTTGCGG CTTTACTGCT TGGCGTGCTT CAGGCGTTGC CGCGAATCGC GGAGACGCGG
ATCAAAAACC GCCTCGTGGT CTGGTATCGC GAAGTGAAGC TGCTGGAAGA TGAGATATGG
CGAAGCGACC GACCAGGCCG GGAGCAGATT TCGCAATGGA GCGAAGAGAT CGAACAGATC
GACGCGCACG CTAACCAGAT ACGCCTGCCG CAGCGATATC TTCCGGATAT TTACGCCCTC
AAGCAGGCTA TTGATGTCGT GAGGGGGCGA ATTTCCTATA TGGCACGACA GACGGAGAAA
TAG
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| Protein sequence | MPPVRSTDQR DQTVPRHNPV LQRARKAPVK PRRPWLFITG AILLLAVSGW VLAIILAPAF
QHTIVVTSGA DGGIYRGFAD RYAPILKQKG ITLDIRSSSG SVENYQRLKD PRSEYQVGFI
QSGTTRPKET DDLKTIAAVS YEPIWVFYRG DTTIDRLAQL RGERISIGVP GSGLLNVALQ
LLAYSGVSGD NTTLLQMDAA KAYQSLENGQ LDAAFFIGRP DAEMQRTLLN SNLKLMSFAQ
ADALVQKFPS LSKVIFPRGS TSIANDRPSA DVTLLAATAL LVAKESLHPA FVYLLLDAAS
AVHGREDYFT PLGKFPNVNT DEFPVSDESI RYFKSGRPFL QRYLPFWLAS FVERRLLILL
PFAALLLGVL QALPRIAETR IKNRLVVWYR EVKLLEDEIW RSDRPGREQI SQWSEEIEQI
DAHANQIRLP QRYLPDIYAL KQAIDVVRGR ISYMARQTEK
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